Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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500 nt 8603 and 8604 are separated by 255 nucleotides8604 and 8605 are separated by 53 nucleotides8605 and 8606 are separated by 1021 nucleotides8606 and 8607 are separated by 351 nucleotides mRNA_235: 8603 - KOG2614 Kynurenine 3-monooxygenase and related flavoprotein monooxygenases, at 578,724 to 580,674 8603 mRNA_236: 8604 - HMMPfam-F-box domain-PF00646,ProSiteProfiles-F-box domain profile.-PS50181,SUPERFAMILY--SSF52047, at 580,930 to 582,126 8604 mRNA_237: 8605 - K08098 PIGZ, SMP3 phosphatidylinositol glycan, class Z, at 582,180 to 584,217 8605 mRNA_238: 8606 - Hypothetical Protein, at 585,239 to 585,472 8606 mRNA_239: 8607 - K01809 manA, MPI mannose-6-phosphate isomerase, at 585,824 to 587,660 8607
Group Condition mRNA_235 mRNA_236 mRNA_237 mRNA_238 mRNA_239
8603 8604 8605 8606 8607
growth on ricinoleic acid YNB Methylricinoleic Acid -0.5 -0.2 N.D. N.D. N.D.
facs on lipid accumulation Sorted Low BODIPY Gate +0.1 -0.6 N.D. N.D. N.D.
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation -0.0 -0.3 N.D. N.D. N.D.
buoyancy on lipid accumulation 40 hrs Low Buoyancy -0.1 -0.1 N.D. N.D. N.D.
auxotrophy YNB Glucose -0.2 +0.0 N.D. N.D. N.D.
growth on ricinoleic acid YNB Glucose +0.1 -0.1 N.D. N.D. N.D.
growth on ricinoleic acid YNB Ricinoleic Acid +0.2 -0.1 N.D. N.D. N.D.
buoyancy on lipid accumulation 40 hrs Median Buoyancy +0.1 +0.0 N.D. N.D. N.D.
growth on oleic acid YNB Glucose +0.1 +0.0 N.D. N.D. N.D.
auxotrophy YNB Glucose 75mM Methionine +0.2 +0.0 N.D. N.D. N.D.
growth on ypd YPD -0.7 +0.9 N.D. N.D. N.D.
auxotrophy Dropout Complete +0.1 +0.1 N.D. N.D. N.D.
auxotrophy YNB Glucose 75mM Arginine -0.0 +0.3 N.D. N.D. N.D.
buoyancy on lipid accumulation 40 hrs High Buoyancy +0.5 -0.1 N.D. N.D. N.D.
growth on oleic acid YNB Oleic Acid +0.3 +0.1 N.D. N.D. N.D.
facs on lipid accumulation Sorted No BODIPY Gate +0.6 -0.1 N.D. N.D. N.D.
facs on lipid accumulation Sorted High BODIPY Gate +0.3 +0.2 N.D. N.D. N.D.
ypd buoyancy 40 hrs Median Buoyancy +0.5 +0.1 N.D. N.D. N.D.
ypd buoyancy 40 hrs High Buoyancy +0.7 +0.1 N.D. N.D. N.D.
ypd buoyancy 40 hrs Low Buoyancy +0.9 +0.3 N.D. N.D. N.D.
ypd buoyancy 40 hrs No Buoyancy Separation +1.2 +0.0 N.D. N.D. N.D.
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