Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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500 nt 8604 and 8605 are separated by 53 nucleotides8605 and 8606 are separated by 1021 nucleotides8606 and 8607 are separated by 351 nucleotides8607 and 8608 are separated by 857 nucleotides mRNA_236: 8604 - HMMPfam-F-box domain-PF00646,ProSiteProfiles-F-box domain profile.-PS50181,SUPERFAMILY--SSF52047, at 580,930 to 582,126 8604 mRNA_237: 8605 - K08098 PIGZ, SMP3 phosphatidylinositol glycan, class Z, at 582,180 to 584,217 8605 mRNA_238: 8606 - Hypothetical Protein, at 585,239 to 585,472 8606 mRNA_239: 8607 - K01809 manA, MPI mannose-6-phosphate isomerase, at 585,824 to 587,660 8607 mRNA_240: 8608 - KOG0254 Predicted transporter (major facilitator superfamily), at 588,518 to 590,085 8608
Group Condition mRNA_236 mRNA_237 mRNA_238 mRNA_239 mRNA_240
8604 8605 8606 8607 8608
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation -0.3 N.D. N.D. N.D. -1.1
facs on lipid accumulation Sorted Low BODIPY Gate -0.6 N.D. N.D. N.D. -0.4
ypd buoyancy 40 hrs No Buoyancy Separation +0.0 N.D. N.D. N.D. -1.0
facs on lipid accumulation Sorted No BODIPY Gate -0.1 N.D. N.D. N.D. -0.8
facs on lipid accumulation Sorted High BODIPY Gate +0.2 N.D. N.D. N.D. -0.6
buoyancy on lipid accumulation 40 hrs Low Buoyancy -0.1 N.D. N.D. N.D. -0.1
growth on oleic acid YNB Glucose +0.0 N.D. N.D. N.D. -0.1
buoyancy on lipid accumulation 40 hrs High Buoyancy -0.1 N.D. N.D. N.D. +0.2
ypd buoyancy 40 hrs High Buoyancy +0.1 N.D. N.D. N.D. -0.0
ypd buoyancy 40 hrs Median Buoyancy +0.1 N.D. N.D. N.D. +0.0
buoyancy on lipid accumulation 40 hrs Median Buoyancy +0.0 N.D. N.D. N.D. +0.2
auxotrophy YNB Glucose 75mM Methionine +0.0 N.D. N.D. N.D. +0.3
ypd buoyancy 40 hrs Low Buoyancy +0.3 N.D. N.D. N.D. +0.1
growth on ypd YPD +0.9 N.D. N.D. N.D. -0.6
auxotrophy Dropout Complete +0.1 N.D. N.D. N.D. +0.2
growth on ricinoleic acid YNB Glucose -0.1 N.D. N.D. N.D. +0.6
growth on ricinoleic acid YNB Ricinoleic Acid -0.1 N.D. N.D. N.D. +0.7
auxotrophy YNB Glucose 75mM Arginine +0.3 N.D. N.D. N.D. +0.2
auxotrophy YNB Glucose +0.0 N.D. N.D. N.D. +0.6
growth on oleic acid YNB Oleic Acid +0.1 N.D. N.D. N.D. +0.5
growth on ricinoleic acid YNB Methylricinoleic Acid -0.2 N.D. N.D. N.D. +1.1
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