Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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Top 21 experiments (either direction), sorted by average fitness

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500 nt 8606 and 8607 are separated by 351 nucleotides8607 and 8608 are separated by 857 nucleotides8608 and 8609 are separated by 265 nucleotides8609 and 8610 are separated by 609 nucleotides mRNA_238: 8606 - Hypothetical Protein, at 585,239 to 585,472 8606 mRNA_239: 8607 - K01809 manA, MPI mannose-6-phosphate isomerase, at 585,824 to 587,660 8607 mRNA_240: 8608 - KOG0254 Predicted transporter (major facilitator superfamily), at 588,518 to 590,085 8608 mRNA_241: 8609 - BLAST 60s ribosomal protein l25 [Moniliophthora roreri ..., at 590,351 to 590,973 8609 mRNA_242: 8610 - HMMPfam-CorA-like Mg2+ transporter protein-PF01544,SUPERFAMILY--SSF143865, at 591,583 to 594,875 8610
Group Condition mRNA_238 mRNA_239 mRNA_240 mRNA_241 mRNA_242
8606 8607 8608 8609 8610
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation N.D. N.D. -1.1 N.D. N.D.
ypd buoyancy 40 hrs No Buoyancy Separation N.D. N.D. -1.0 N.D. N.D.
facs on lipid accumulation Sorted No BODIPY Gate N.D. N.D. -0.8 N.D. N.D.
facs on lipid accumulation Sorted High BODIPY Gate N.D. N.D. -0.6 N.D. N.D.
growth on ypd YPD N.D. N.D. -0.6 N.D. N.D.
facs on lipid accumulation Sorted Low BODIPY Gate N.D. N.D. -0.4 N.D. N.D.
buoyancy on lipid accumulation 40 hrs Low Buoyancy N.D. N.D. -0.1 N.D. N.D.
growth on oleic acid YNB Glucose N.D. N.D. -0.1 N.D. N.D.
ypd buoyancy 40 hrs High Buoyancy N.D. N.D. -0.0 N.D. N.D.
ypd buoyancy 40 hrs Median Buoyancy N.D. N.D. +0.0 N.D. N.D.
ypd buoyancy 40 hrs Low Buoyancy N.D. N.D. +0.1 N.D. N.D.
buoyancy on lipid accumulation 40 hrs High Buoyancy N.D. N.D. +0.2 N.D. N.D.
buoyancy on lipid accumulation 40 hrs Median Buoyancy N.D. N.D. +0.2 N.D. N.D.
auxotrophy Dropout Complete N.D. N.D. +0.2 N.D. N.D.
auxotrophy YNB Glucose 75mM Arginine N.D. N.D. +0.2 N.D. N.D.
auxotrophy YNB Glucose 75mM Methionine N.D. N.D. +0.3 N.D. N.D.
growth on oleic acid YNB Oleic Acid N.D. N.D. +0.5 N.D. N.D.
auxotrophy YNB Glucose N.D. N.D. +0.6 N.D. N.D.
growth on ricinoleic acid YNB Glucose N.D. N.D. +0.6 N.D. N.D.
growth on ricinoleic acid YNB Ricinoleic Acid N.D. N.D. +0.7 N.D. N.D.
growth on ricinoleic acid YNB Methylricinoleic Acid N.D. N.D. +1.1 N.D. N.D.
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