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Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
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Top 21 experiments (either direction), sorted by average fitness
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500 nt
8610 and 8611 are separated by 231 nucleotides
8611 and 8612 are separated by 503 nucleotides
8612 and 8613 are separated by 323 nucleotides
8613 and 8614 are separated by 69 nucleotides
mRNA_242: 8610 - HMMPfam-CorA-like Mg2+ transporter protein-PF01544,SUPERFAMILY--SSF143865, at 591,583 to 594,875
8610
mRNA_243: 8611 - HMMPfam-Replication factor A protein 3-PF08661,SUPERFAMILY--SSF50249, at 595,107 to 595,773
8611
mRNA_244: 8612 - K17778 TIM10 mitochondrial import inner membrane translocase subunit TIM10, at 596,277 to 596,788
8612
mRNA_245: 8613 - KOG0256 1-aminocyclopropane-1-carboxylate synthase, and related proteins, at 597,112 to 598,781
8613
mRNA_246: 8614 - Hypothetical Protein, at 598,851 to 601,414
8614
Group
Condition
mRNA
_242
mRNA
_243
mRNA
_244
mRNA
_245
mRNA
_246
8610
8611
8612
8613
8614
facs on lipid accumulation
Sorted Low BODIPY Gate
N.D.
N.D.
N.D.
-0.8
-0.1
facs on lipid accumulation
Sorted No BODIPY Gate
N.D.
N.D.
N.D.
-0.7
-0.1
facs on lipid accumulation
Sorted High BODIPY Gate
N.D.
N.D.
N.D.
-0.3
-0.2
buoyancy on lipid accumulation
40 hrs High Buoyancy
N.D.
N.D.
N.D.
-0.3
-0.0
growth on ricinoleic acid
YNB Methylricinoleic Acid
N.D.
N.D.
N.D.
-0.2
+0.0
growth on ricinoleic acid
YNB Ricinoleic Acid
N.D.
N.D.
N.D.
-0.2
-0.0
ypd buoyancy
40 hrs No Buoyancy Separation
N.D.
N.D.
N.D.
-0.1
+0.0
ypd buoyancy
40 hrs High Buoyancy
N.D.
N.D.
N.D.
-0.0
-0.0
buoyancy on lipid accumulation
40 hrs Low Buoyancy
N.D.
N.D.
N.D.
+0.0
-0.1
growth on ricinoleic acid
YNB Glucose
N.D.
N.D.
N.D.
-0.0
-0.0
buoyancy on lipid accumulation
40 hrs Median Buoyancy
N.D.
N.D.
N.D.
-0.0
-0.0
growth on oleic acid
YNB Glucose
N.D.
N.D.
N.D.
-0.1
+0.1
auxotrophy
Dropout Complete
N.D.
N.D.
N.D.
+0.0
+0.0
ypd buoyancy
40 hrs Low Buoyancy
N.D.
N.D.
N.D.
+0.1
-0.1
growth on oleic acid
YNB Oleic Acid
N.D.
N.D.
N.D.
-0.1
+0.2
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
N.D.
N.D.
N.D.
+0.2
-0.1
auxotrophy
YNB Glucose 75mM Methionine
N.D.
N.D.
N.D.
+0.2
-0.0
ypd buoyancy
40 hrs Median Buoyancy
N.D.
N.D.
N.D.
+0.1
+0.0
auxotrophy
YNB Glucose 75mM Arginine
N.D.
N.D.
N.D.
+0.2
+0.0
growth on ypd
YPD
N.D.
N.D.
N.D.
+0.4
+0.1
auxotrophy
YNB Glucose
N.D.
N.D.
N.D.
+0.4
+0.1
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