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Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
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Top 21 experiments (either direction), sorted by average fitness
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500 nt
8613 and 8614 are separated by 69 nucleotides
8614 and 8615 are separated by 797 nucleotides
8615 and 8616 are separated by 666 nucleotides
8616 and 8617 are separated by 175 nucleotides
mRNA_245: 8613 - KOG0256 1-aminocyclopropane-1-carboxylate synthase, and related proteins, at 597,112 to 598,781
8613
mRNA_246: 8614 - Hypothetical Protein, at 598,851 to 601,414
8614
mRNA_247: 8615 - K11254 H4 histone H4, at 602,212 to 602,729
8615
mRNA_248: 8616 - K01796 E5.1.99.4, AMACR, mcr alpha-methylacyl-CoA racemase, at 603,396 to 605,038
8616
mRNA_249: 8617 - K03538 POP4, RPP29 ribonuclease P protein subunit POP4, at 605,214 to 606,480
8617
Group
Condition
mRNA
_245
mRNA
_246
mRNA
_247
mRNA
_248
mRNA
_249
8613
8614
8615
8616
8617
facs on lipid accumulation
Sorted Low BODIPY Gate
-0.8
-0.1
N.D.
-0.2
N.D.
facs on lipid accumulation
Sorted No BODIPY Gate
-0.7
-0.1
N.D.
-0.1
N.D.
growth on ricinoleic acid
YNB Methylricinoleic Acid
-0.2
+0.0
N.D.
-0.2
N.D.
ypd buoyancy
40 hrs High Buoyancy
-0.0
-0.0
N.D.
-0.3
N.D.
growth on ricinoleic acid
YNB Ricinoleic Acid
-0.2
-0.0
N.D.
-0.1
N.D.
ypd buoyancy
40 hrs Median Buoyancy
+0.1
+0.0
N.D.
-0.4
N.D.
buoyancy on lipid accumulation
40 hrs High Buoyancy
-0.3
-0.0
N.D.
+0.1
N.D.
ypd buoyancy
40 hrs Low Buoyancy
+0.1
-0.1
N.D.
-0.2
N.D.
growth on ricinoleic acid
YNB Glucose
-0.0
-0.0
N.D.
+0.0
N.D.
auxotrophy
Dropout Complete
+0.0
+0.0
N.D.
-0.1
N.D.
growth on oleic acid
YNB Glucose
-0.1
+0.1
N.D.
+0.0
N.D.
ypd buoyancy
40 hrs No Buoyancy Separation
-0.1
+0.0
N.D.
+0.1
N.D.
facs on lipid accumulation
Sorted High BODIPY Gate
-0.3
-0.2
N.D.
+0.5
N.D.
buoyancy on lipid accumulation
40 hrs Low Buoyancy
+0.0
-0.1
N.D.
+0.1
N.D.
auxotrophy
YNB Glucose 75mM Methionine
+0.2
-0.0
N.D.
-0.1
N.D.
buoyancy on lipid accumulation
40 hrs Median Buoyancy
-0.0
-0.0
N.D.
+0.2
N.D.
growth on oleic acid
YNB Oleic Acid
-0.1
+0.2
N.D.
+0.1
N.D.
auxotrophy
YNB Glucose 75mM Arginine
+0.2
+0.0
N.D.
+0.0
N.D.
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
+0.2
-0.1
N.D.
+0.2
N.D.
growth on ypd
YPD
+0.4
+0.1
N.D.
-0.0
N.D.
auxotrophy
YNB Glucose
+0.4
+0.1
N.D.
-0.0
N.D.
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