Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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500 nt 8617 and 8618 are separated by 832 nucleotides8618 and 8619 are separated by 136 nucleotides8619 and 8620 are separated by 168 nucleotides8620 and 8621 are separated by 159 nucleotides mRNA_249: 8617 - K03538 POP4, RPP29 ribonuclease P protein subunit POP4, at 605,214 to 606,480 8617 mRNA_250: 8618 - K19245 JLP1 sulfonate dioxygenase, at 607,313 to 608,781 8618 mRNA_251: 8619 - HMMPfam-ACT domain-PF13840,PIRSF--PIRSF008459,SUPERFAMILY--SSF55021, at 608,918 to 609,439 8619 mRNA_252: 8620 - Hypothetical Protein, at 609,608 to 610,870 8620 mRNA_253: 8621 - KOG2273 Membrane coat complex Retromer, subunit VPS5/SNX1, Sorting nexins, and related PX domain-containing proteins, at 611,030 to 612,229 8621
Group Condition mRNA_249 mRNA_250 mRNA_251 mRNA_252 mRNA_253
8617 8618 8619 8620 8621
auxotrophy YNB Glucose 75mM Methionine N.D. -0.1 -0.3 -0.1 -0.4
facs on lipid accumulation Sorted High BODIPY Gate N.D. -0.8 -0.3 +0.1 +0.3
auxotrophy YNB Glucose 75mM Arginine N.D. -0.0 -0.1 -0.0 -0.6
auxotrophy YNB Glucose N.D. +0.1 -0.1 -0.1 -0.6
ypd buoyancy 40 hrs Low Buoyancy N.D. -0.0 -0.4 -0.2 +0.0
ypd buoyancy 40 hrs No Buoyancy Separation N.D. +0.2 -0.6 +0.0 -0.2
facs on lipid accumulation Sorted Low BODIPY Gate N.D. -0.7 +0.0 -0.2 +0.5
facs on lipid accumulation Sorted No BODIPY Gate N.D. -0.7 +0.1 -0.1 +0.3
auxotrophy Dropout Complete N.D. +0.2 -0.3 +0.2 -0.6
ypd buoyancy 40 hrs High Buoyancy N.D. -0.0 -0.4 -0.0 +0.0
growth on oleic acid YNB Glucose N.D. -0.3 +0.3 -0.3 +0.0
growth on ricinoleic acid YNB Methylricinoleic Acid N.D. -0.1 +0.2 -0.1 -0.2
buoyancy on lipid accumulation 40 hrs High Buoyancy N.D. +0.2 -0.1 +0.3 -0.4
growth on oleic acid YNB Oleic Acid N.D. -0.4 +0.5 +0.1 -0.1
ypd buoyancy 40 hrs Median Buoyancy N.D. +0.1 -0.2 -0.2 +0.4
growth on ricinoleic acid YNB Ricinoleic Acid N.D. -0.1 +0.2 +0.2 +0.0
growth on ypd YPD N.D. -0.1 +0.6 -0.2 +0.2
growth on ricinoleic acid YNB Glucose N.D. +0.2 +0.2 +0.0 +0.1
buoyancy on lipid accumulation 40 hrs Low Buoyancy N.D. -0.1 +0.4 +0.4 -0.1
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation N.D. +0.2 +0.7 +0.4 -0.5
buoyancy on lipid accumulation 40 hrs Median Buoyancy N.D. +0.2 +0.4 +0.4 +0.1
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