Fitness for 5 genes in Rhodosporidium toruloides IFO0880

Add gene:

Number of genes on each side:  

Top 21 experiments (either direction), sorted by average fitness

Or view all 21 experiments or choose conditions or try the comparative fitness browser

500 nt 8618 and 8619 are separated by 136 nucleotides8619 and 8620 are separated by 168 nucleotides8620 and 8621 are separated by 159 nucleotides8621 and 8622 are separated by 292 nucleotides mRNA_250: 8618 - K19245 JLP1 sulfonate dioxygenase, at 607,313 to 608,781 8618 mRNA_251: 8619 - HMMPfam-ACT domain-PF13840,PIRSF--PIRSF008459,SUPERFAMILY--SSF55021, at 608,918 to 609,439 8619 mRNA_252: 8620 - Hypothetical Protein, at 609,608 to 610,870 8620 mRNA_253: 8621 - KOG2273 Membrane coat complex Retromer, subunit VPS5/SNX1, Sorting nexins, and related PX domain-containing proteins, at 611,030 to 612,229 8621 mRNA_254: 8622 - KOG0970 DNA polymerase alpha, catalytic subunit, at 612,522 to 613,328 8622
Group Condition mRNA_250 mRNA_251 mRNA_252 mRNA_253 mRNA_254
8618 8619 8620 8621 8622
auxotrophy YNB Glucose 75mM Methionine -0.1 -0.3 -0.1 -0.4 N.D.
facs on lipid accumulation Sorted High BODIPY Gate -0.8 -0.3 +0.1 +0.3 N.D.
auxotrophy YNB Glucose 75mM Arginine -0.0 -0.1 -0.0 -0.6 N.D.
auxotrophy YNB Glucose +0.1 -0.1 -0.1 -0.6 N.D.
ypd buoyancy 40 hrs Low Buoyancy -0.0 -0.4 -0.2 +0.0 N.D.
ypd buoyancy 40 hrs No Buoyancy Separation +0.2 -0.6 +0.0 -0.2 N.D.
facs on lipid accumulation Sorted Low BODIPY Gate -0.7 +0.0 -0.2 +0.5 N.D.
facs on lipid accumulation Sorted No BODIPY Gate -0.7 +0.1 -0.1 +0.3 N.D.
auxotrophy Dropout Complete +0.2 -0.3 +0.2 -0.6 N.D.
ypd buoyancy 40 hrs High Buoyancy -0.0 -0.4 -0.0 +0.0 N.D.
growth on oleic acid YNB Glucose -0.3 +0.3 -0.3 +0.0 N.D.
growth on ricinoleic acid YNB Methylricinoleic Acid -0.1 +0.2 -0.1 -0.2 N.D.
buoyancy on lipid accumulation 40 hrs High Buoyancy +0.2 -0.1 +0.3 -0.4 N.D.
growth on oleic acid YNB Oleic Acid -0.4 +0.5 +0.1 -0.1 N.D.
ypd buoyancy 40 hrs Median Buoyancy +0.1 -0.2 -0.2 +0.4 N.D.
growth on ricinoleic acid YNB Ricinoleic Acid -0.1 +0.2 +0.2 +0.0 N.D.
growth on ypd YPD -0.1 +0.6 -0.2 +0.2 N.D.
growth on ricinoleic acid YNB Glucose +0.2 +0.2 +0.0 +0.1 N.D.
buoyancy on lipid accumulation 40 hrs Low Buoyancy -0.1 +0.4 +0.4 -0.1 N.D.
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation +0.2 +0.7 +0.4 -0.5 N.D.
buoyancy on lipid accumulation 40 hrs Median Buoyancy +0.2 +0.4 +0.4 +0.1 N.D.
remove
mRNA_250
plot
remove
mRNA_251
plot
remove
mRNA_252
remove
mRNA_253
plot
remove
mRNA_254
plot