Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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500 nt 8627 and 8628 are separated by 251 nucleotides8628 and 8629 are separated by 19 nucleotides8629 and 8630 are separated by 264 nucleotides8630 and 8631 are separated by 832 nucleotides mRNA_259: 8627 - HMMPfam-Domain of unknown function (DUF1771)-PF08590,ProSiteProfiles-Zinc finger C3H1-type profile.-PS50103,ProSiteProfiles-Smr domain profile.-PS50828,SMART-zinc finger-SM00356, at 622,490 to 625,658 8627 mRNA_260: 8628 - KOG2534 DNA polymerase IV (family X), at 625,910 to 627,593 8628 mRNA_261: 8629 - KOG1745 Histones H3 and H4, at 627,613 to 628,433 8629 mRNA_262: 8630 - HMMPfam-Flavin reductase like domain-PF01613, at 628,698 to 628,997 8630 mRNA_263: 8631 - K01537 E3.6.3.8 Ca2+-transporting ATPase, at 629,830 to 634,837 8631
Group Condition mRNA_259 mRNA_260 mRNA_261 mRNA_262 mRNA_263
8627 8628 8629 8630 8631
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation -0.5 -1.1 -0.4 N.D. -0.1
buoyancy on lipid accumulation 40 hrs High Buoyancy +0.0 -0.9 -0.5 N.D. +0.2
facs on lipid accumulation Sorted High BODIPY Gate -0.6 +0.5 -0.1 N.D. -0.9
ypd buoyancy 40 hrs No Buoyancy Separation +0.2 -0.1 +0.0 N.D. -1.0
buoyancy on lipid accumulation 40 hrs Median Buoyancy -0.2 -0.6 +0.1 N.D. -0.1
facs on lipid accumulation Sorted Low BODIPY Gate +0.4 -0.3 -0.4 N.D. -0.3
growth on ypd YPD -0.2 -0.2 +0.1 N.D. -0.0
ypd buoyancy 40 hrs Median Buoyancy -0.3 -0.1 -0.2 N.D. +0.5
ypd buoyancy 40 hrs Low Buoyancy +0.2 -0.0 +0.2 N.D. -0.5
auxotrophy Dropout Complete -0.1 -0.0 -0.6 N.D. +0.6
facs on lipid accumulation Sorted No BODIPY Gate +0.3 +0.2 +0.1 N.D. -0.5
ypd buoyancy 40 hrs High Buoyancy +0.3 -0.1 +0.1 N.D. -0.1
buoyancy on lipid accumulation 40 hrs Low Buoyancy +0.2 -0.0 +0.2 N.D. +0.1
growth on oleic acid YNB Glucose -0.1 +0.4 -0.0 N.D. +0.6
auxotrophy YNB Glucose 75mM Arginine +0.1 -0.1 -0.3 N.D. +1.1
auxotrophy YNB Glucose 75mM Methionine +0.4 -0.2 -0.3 N.D. +1.0
growth on oleic acid YNB Oleic Acid +0.2 +0.3 +0.2 N.D. +0.5
growth on ricinoleic acid YNB Ricinoleic Acid +1.2 -0.1 +0.1 N.D. +0.2
growth on ricinoleic acid YNB Methylricinoleic Acid +1.0 +0.1 -0.4 N.D. +1.0
auxotrophy YNB Glucose +0.2 +0.1 +0.3 N.D. +1.1
growth on ricinoleic acid YNB Glucose +0.8 +0.1 +0.3 N.D. +1.0
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