Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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500 nt 8628 and 8629 are separated by 19 nucleotides8629 and 8630 are separated by 264 nucleotides8630 and 8631 are separated by 832 nucleotides8631 and 8632 are separated by 1458 nucleotides mRNA_260: 8628 - KOG2534 DNA polymerase IV (family X), at 625,910 to 627,593 8628 mRNA_261: 8629 - KOG1745 Histones H3 and H4, at 627,613 to 628,433 8629 mRNA_262: 8630 - HMMPfam-Flavin reductase like domain-PF01613, at 628,698 to 628,997 8630 mRNA_263: 8631 - K01537 E3.6.3.8 Ca2+-transporting ATPase, at 629,830 to 634,837 8631 mRNA_264: 8632 - BLAST phosphoglycerate mutase-like protein [Sanghuangporus ..., at 636,296 to 637,192 8632
Group Condition mRNA_260 mRNA_261 mRNA_262 mRNA_263 mRNA_264
8628 8629 8630 8631 8632
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation -1.1 -0.4 N.D. -0.1 -0.1
buoyancy on lipid accumulation 40 hrs High Buoyancy -0.9 -0.5 N.D. +0.2 +0.0
ypd buoyancy 40 hrs No Buoyancy Separation -0.1 +0.0 N.D. -1.0 +0.3
buoyancy on lipid accumulation 40 hrs Median Buoyancy -0.6 +0.1 N.D. -0.1 -0.3
facs on lipid accumulation Sorted Low BODIPY Gate -0.3 -0.4 N.D. -0.3 +0.3
ypd buoyancy 40 hrs Low Buoyancy -0.0 +0.2 N.D. -0.5 -0.1
facs on lipid accumulation Sorted No BODIPY Gate +0.2 +0.1 N.D. -0.5 -0.0
growth on ricinoleic acid YNB Ricinoleic Acid -0.1 +0.1 N.D. +0.2 -0.4
facs on lipid accumulation Sorted High BODIPY Gate +0.5 -0.1 N.D. -0.9 +0.3
ypd buoyancy 40 hrs High Buoyancy -0.1 +0.1 N.D. -0.1 +0.1
auxotrophy Dropout Complete -0.0 -0.6 N.D. +0.6 -0.0
growth on ypd YPD -0.2 +0.1 N.D. -0.0 +0.2
growth on ricinoleic acid YNB Methylricinoleic Acid +0.1 -0.4 N.D. +1.0 -0.4
buoyancy on lipid accumulation 40 hrs Low Buoyancy -0.0 +0.2 N.D. +0.1 -0.1
ypd buoyancy 40 hrs Median Buoyancy -0.1 -0.2 N.D. +0.5 +0.1
auxotrophy YNB Glucose 75mM Methionine -0.2 -0.3 N.D. +1.0 -0.1
growth on oleic acid YNB Glucose +0.4 -0.0 N.D. +0.6 -0.2
auxotrophy YNB Glucose 75mM Arginine -0.1 -0.3 N.D. +1.1 +0.1
growth on ricinoleic acid YNB Glucose +0.1 +0.3 N.D. +1.0 -0.5
growth on oleic acid YNB Oleic Acid +0.3 +0.2 N.D. +0.5 -0.0
auxotrophy YNB Glucose +0.1 +0.3 N.D. +1.1 -0.2
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