Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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500 nt 8632 and 8633 are separated by 286 nucleotides8633 and 8634 are separated by 141 nucleotides8634 and 8635 are separated by 345 nucleotides8635 and 8636 are separated by 253 nucleotides mRNA_264: 8632 - BLAST phosphoglycerate mutase-like protein [Sanghuangporus ..., at 636,296 to 637,192 8632 mRNA_265: 8633 - K00876 udk, UCK uridine kinase, at 637,479 to 639,717 8633 mRNA_266: 8634 - KOG0111 Cyclophilin-type peptidyl-prolyl cis-trans isomerase, at 639,859 to 640,522 8634 mRNA_267: 8635 - K03381 catA catechol 1,2-dioxygenase, at 640,868 to 642,235 8635 mRNA_268: 8636 - HMMPfam-Fungal Zn(2)-Cys(6) binuclear cluster domain-PF00172,HMMPfam-Fungal specific transcription factor domain-PF04082,ProSitePatterns-Zn(2)-C6 fungal-type DNA-binding domain signature.-PS00463,ProSiteProfiles-Zn(2)-C6 fungal-type DNA-binding domain profile.-PS50048,SMART-GAL4-like Zn(II)2Cys6 (or C6 zinc) binuclear cluster DNA-binding domain-SM00066,SMART-Fungal specific transcription factor domain-SM00906,SUPERFAMILY--SSF57701, at 642,489 to 643,919 8636
Group Condition mRNA_264 mRNA_265 mRNA_266 mRNA_267 mRNA_268
8632 8633 8634 8635 8636
facs on lipid accumulation Sorted High BODIPY Gate +0.3 +0.1 N.D. -2.7 -0.5
growth on oleic acid YNB Glucose -0.2 +0.5 N.D. -1.9 -0.3
buoyancy on lipid accumulation 40 hrs Median Buoyancy -0.3 -0.3 N.D. -0.6 -0.4
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation -0.1 -0.4 N.D. -1.6 +0.7
growth on ricinoleic acid YNB Ricinoleic Acid -0.4 +0.4 N.D. -1.0 +0.2
growth on ricinoleic acid YNB Methylricinoleic Acid -0.4 -0.1 N.D. -0.7 +0.4
buoyancy on lipid accumulation 40 hrs Low Buoyancy -0.1 +0.1 N.D. -0.8 -0.1
buoyancy on lipid accumulation 40 hrs High Buoyancy +0.0 -0.2 N.D. -0.6 -0.0
facs on lipid accumulation Sorted No BODIPY Gate -0.0 -0.1 N.D. -0.2 -0.3
growth on ricinoleic acid YNB Glucose -0.5 +0.1 N.D. +0.2 -0.2
ypd buoyancy 40 hrs Median Buoyancy +0.1 +0.1 N.D. -0.0 -0.6
auxotrophy YNB Glucose 75mM Arginine +0.1 +0.3 N.D. -0.4 -0.1
growth on ypd YPD +0.2 +0.5 N.D. -0.6 -0.2
auxotrophy YNB Glucose -0.2 +0.3 N.D. +0.2 +0.2
ypd buoyancy 40 hrs Low Buoyancy -0.1 +0.4 N.D. -0.0 +0.3
ypd buoyancy 40 hrs High Buoyancy +0.1 +0.4 N.D. +0.6 -0.4
growth on oleic acid YNB Oleic Acid -0.0 +0.4 N.D. -0.2 +0.5
auxotrophy Dropout Complete -0.0 +0.3 N.D. +0.6 -0.1
auxotrophy YNB Glucose 75mM Methionine -0.1 +0.1 N.D. +0.5 +0.2
facs on lipid accumulation Sorted Low BODIPY Gate +0.3 -0.2 N.D. +0.6 +0.1
ypd buoyancy 40 hrs No Buoyancy Separation +0.3 -0.0 N.D. +1.6 -0.7
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