Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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500 nt 8636 and 8637 are separated by 129 nucleotides8637 and 8638 are separated by 272 nucleotides8638 and 8639 are separated by 317 nucleotides8639 and 8640 are separated by 531 nucleotides mRNA_268: 8636 - HMMPfam-Fungal Zn(2)-Cys(6) binuclear cluster domain-PF00172,HMMPfam-Fungal specific transcription factor domain-PF04082,ProSitePatterns-Zn(2)-C6 fungal-type DNA-binding domain signature.-PS00463,ProSiteProfiles-Zn(2)-C6 fungal-type DNA-binding domain profile.-PS50048,SMART-GAL4-like Zn(II)2Cys6 (or C6 zinc) binuclear cluster DNA-binding domain-SM00066,SMART-Fungal specific transcription factor domain-SM00906,SUPERFAMILY--SSF57701, at 642,489 to 643,919 8636 mRNA_269: 8637 - BLAST nitrogen assimilation transcription factor [Rhodo..., at 644,049 to 645,349 8637 mRNA_270: 8638 - BLAST protein of unknown function [Taphrina deformans PYCC ..., at 645,622 to 646,120 8638 mRNA_271: 8639 - K11262 ACACA acetyl-CoA carboxylase / biotin carboxylase 1, at 646,438 to 653,784 8639 mRNA_272: 8640 - KOG4178 Soluble epoxide hydrolase, at 654,316 to 655,397 8640
Group Condition mRNA_268 mRNA_269 mRNA_270 mRNA_271 mRNA_272
8636 8637 8638 8639 8640
ypd buoyancy 40 hrs No Buoyancy Separation -0.7 +0.8 N.D. N.D. -2.4
buoyancy on lipid accumulation 40 hrs Median Buoyancy -0.4 +0.2 N.D. N.D. -1.9
facs on lipid accumulation Sorted High BODIPY Gate -0.5 +0.1 N.D. N.D. -1.4
buoyancy on lipid accumulation 40 hrs High Buoyancy -0.0 +0.3 N.D. N.D. -1.8
ypd buoyancy 40 hrs High Buoyancy -0.4 +0.4 N.D. N.D. -1.4
auxotrophy Dropout Complete -0.1 -0.1 N.D. N.D. -0.9
facs on lipid accumulation Sorted Low BODIPY Gate +0.1 +0.0 N.D. N.D. -1.2
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation +0.7 +0.4 N.D. N.D. -2.1
buoyancy on lipid accumulation 40 hrs Low Buoyancy -0.1 +0.5 N.D. N.D. -1.3
ypd buoyancy 40 hrs Median Buoyancy -0.6 +0.2 N.D. N.D. -0.5
growth on ypd YPD -0.2 -0.3 N.D. N.D. -0.3
auxotrophy YNB Glucose 75mM Arginine -0.1 -0.4 N.D. N.D. -0.2
growth on oleic acid YNB Glucose -0.3 -0.2 N.D. N.D. +0.0
auxotrophy YNB Glucose 75mM Methionine +0.2 -0.4 N.D. N.D. -0.2
growth on ricinoleic acid YNB Methylricinoleic Acid +0.4 -0.3 N.D. N.D. -0.5
facs on lipid accumulation Sorted No BODIPY Gate -0.3 -0.2 N.D. N.D. +0.2
growth on ricinoleic acid YNB Glucose -0.2 -0.1 N.D. N.D. +0.3
auxotrophy YNB Glucose +0.2 -0.2 N.D. N.D. -0.1
ypd buoyancy 40 hrs Low Buoyancy +0.3 +0.1 N.D. N.D. -0.3
growth on ricinoleic acid YNB Ricinoleic Acid +0.2 -0.3 N.D. N.D. +0.5
growth on oleic acid YNB Oleic Acid +0.5 +0.1 N.D. N.D. +0.3
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