Fitness for 5 genes in Rhodosporidium toruloides IFO0880

Add gene:

Number of genes on each side:  

Top 21 experiments (either direction), sorted by average fitness

Or view all 21 experiments or choose conditions or try the comparative fitness browser

500 nt 8642 and 8643 are separated by 1111 nucleotides8643 and 8644 are separated by 230 nucleotides8644 and 8645 are separated by 1091 nucleotides8645 and 8646 are separated by 257 nucleotides mRNA_274: 8642 - BLAST Putative Pc16g06240 protein [Torrubiella hemipterigena], at 657,663 to 658,330 8642 mRNA_275: 8643 - BLAST nitrogen assimilation transcription factor [Rhodo..., at 659,442 to 660,346 8643 mRNA_276: 8644 - K03679 RRP4, EXOSC2 exosome complex component RRP4, at 660,577 to 661,885 8644 mRNA_277: 8645 - KOG3122 DNA-directed RNA polymerase III subunit, at 662,977 to 664,495 8645 mRNA_278: 8646 - K03134 TAF10 transcription initiation factor TFIID subunit 10, at 664,753 to 665,683 8646
Group Condition mRNA_274 mRNA_275 mRNA_276 mRNA_277 mRNA_278
8642 8643 8644 8645 8646
ypd buoyancy 40 hrs No Buoyancy Separation +0.1 -1.6 N.D. N.D. N.D.
ypd buoyancy 40 hrs Low Buoyancy +0.1 -1.1 N.D. N.D. N.D.
auxotrophy YNB Glucose -0.4 -0.1 N.D. N.D. N.D.
ypd buoyancy 40 hrs Median Buoyancy +0.5 -0.6 N.D. N.D. N.D.
ypd buoyancy 40 hrs High Buoyancy +0.0 -0.1 N.D. N.D. N.D.
facs on lipid accumulation Sorted High BODIPY Gate +0.3 -0.3 N.D. N.D. N.D.
growth on ricinoleic acid YNB Glucose +1.2 -0.8 N.D. N.D. N.D.
buoyancy on lipid accumulation 40 hrs High Buoyancy +0.4 +0.2 N.D. N.D. N.D.
growth on oleic acid YNB Glucose +0.8 -0.2 N.D. N.D. N.D.
growth on ypd YPD +0.1 +0.6 N.D. N.D. N.D.
growth on ricinoleic acid YNB Ricinoleic Acid +1.0 -0.3 N.D. N.D. N.D.
buoyancy on lipid accumulation 40 hrs Median Buoyancy +0.4 +0.3 N.D. N.D. N.D.
buoyancy on lipid accumulation 40 hrs Low Buoyancy +0.7 +0.1 N.D. N.D. N.D.
auxotrophy YNB Glucose 75mM Methionine -0.2 +1.0 N.D. N.D. N.D.
growth on ricinoleic acid YNB Methylricinoleic Acid +1.4 -0.3 N.D. N.D. N.D.
growth on oleic acid YNB Oleic Acid +1.3 -0.2 N.D. N.D. N.D.
auxotrophy Dropout Complete +0.1 +1.1 N.D. N.D. N.D.
auxotrophy YNB Glucose 75mM Arginine -0.3 +1.6 N.D. N.D. N.D.
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation +1.3 +0.5 N.D. N.D. N.D.
facs on lipid accumulation Sorted Low BODIPY Gate +1.6 +0.4 N.D. N.D. N.D.
facs on lipid accumulation Sorted No BODIPY Gate +2.1 +0.5 N.D. N.D. N.D.
remove
mRNA_274
plot		 remove
mRNA_275
plot		 remove
mRNA_276		 remove
mRNA_277
plot		 remove
mRNA_278
plot