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Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
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Top 21 experiments (either direction), sorted by average fitness
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500 nt
8653 and 8654 are separated by 728 nucleotides
8654 and 8655 are separated by 253 nucleotides
8655 and 8656 are separated by 194 nucleotides
8656 and 8657 are separated by 136 nucleotides
mRNA_285: 8653 - Hypothetical Protein, at 678,143 to 678,782
8653
mRNA_286: 8654 - SUPERFAMILY--SSF52047, at 679,511 to 681,745
8654
mRNA_287: 8655 - KOG1861 Leucine permease transcriptional regulator, at 681,999 to 683,854
8655
mRNA_288: 8656 - K00521 E1.16.1.7 ferric-chelate reductase, at 684,049 to 686,611
8656
mRNA_289: 8657 - HMMPfam-Major Facilitator Superfamily-PF07690,ProSiteProfiles-Major facilitator superfamily (MFS) profile.-PS50850,SUPERFAMILY--SSF103473, at 686,748 to 688,788
8657
Group
Condition
mRNA
_285
mRNA
_286
mRNA
_287
mRNA
_288
mRNA
_289
8653
8654
8655
8656
8657
facs on lipid accumulation
Sorted Low BODIPY Gate
-0.4
-0.1
N.D.
-0.5
+0.0
ypd buoyancy
40 hrs No Buoyancy Separation
+0.7
-0.5
N.D.
-0.9
-0.1
facs on lipid accumulation
Sorted No BODIPY Gate
+0.2
-0.3
N.D.
-0.3
-0.1
facs on lipid accumulation
Sorted High BODIPY Gate
+0.2
-0.5
N.D.
+0.0
-0.2
growth on ricinoleic acid
YNB Methylricinoleic Acid
-0.1
+0.1
N.D.
-0.3
+0.1
auxotrophy
Dropout Complete
-0.7
+0.2
N.D.
+0.3
-0.1
ypd buoyancy
40 hrs High Buoyancy
-0.1
+0.2
N.D.
-0.3
+0.1
auxotrophy
YNB Glucose
-0.7
+0.1
N.D.
+0.2
+0.3
ypd buoyancy
40 hrs Low Buoyancy
-0.2
+0.1
N.D.
-0.3
+0.2
growth on oleic acid
YNB Glucose
+0.2
-0.1
N.D.
-0.0
+0.1
auxotrophy
YNB Glucose 75mM Arginine
-0.2
+0.2
N.D.
+0.1
+0.2
ypd buoyancy
40 hrs Median Buoyancy
+0.6
-0.2
N.D.
-0.3
+0.3
auxotrophy
YNB Glucose 75mM Methionine
-0.2
+0.3
N.D.
+0.2
+0.1
growth on ricinoleic acid
YNB Ricinoleic Acid
-0.4
+0.6
N.D.
+0.2
-0.0
growth on oleic acid
YNB Oleic Acid
+0.4
+0.3
N.D.
+0.1
-0.1
growth on ypd
YPD
+0.4
-0.1
N.D.
+0.3
-0.0
growth on ricinoleic acid
YNB Glucose
+0.2
+0.8
N.D.
-0.1
-0.2
buoyancy on lipid accumulation
40 hrs Low Buoyancy
+0.9
+0.7
N.D.
-0.3
-0.2
buoyancy on lipid accumulation
40 hrs High Buoyancy
+1.0
-0.1
N.D.
+0.1
+0.2
buoyancy on lipid accumulation
40 hrs Median Buoyancy
+0.8
+0.4
N.D.
-0.0
+0.1
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
+1.2
+0.8
N.D.
-0.0
+0.0
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