Fitness for 5 genes in Rhodosporidium toruloides IFO0880

Add gene:

Number of genes on each side:  

Top 21 experiments (either direction), sorted by average fitness

Or view all 21 experiments or choose conditions or try the comparative fitness browser

500 nt 8654 and 8655 are separated by 253 nucleotides8655 and 8656 are separated by 194 nucleotides8656 and 8657 are separated by 136 nucleotides8657 and 8658 are separated by 358 nucleotides mRNA_286: 8654 - SUPERFAMILY--SSF52047, at 679,511 to 681,745 8654 mRNA_287: 8655 - KOG1861 Leucine permease transcriptional regulator, at 681,999 to 683,854 8655 mRNA_288: 8656 - K00521 E1.16.1.7 ferric-chelate reductase, at 684,049 to 686,611 8656 mRNA_289: 8657 - HMMPfam-Major Facilitator Superfamily-PF07690,ProSiteProfiles-Major facilitator superfamily (MFS) profile.-PS50850,SUPERFAMILY--SSF103473, at 686,748 to 688,788 8657 mRNA_290: 8658 - HMMPfam-Major Facilitator Superfamily-PF07690,ProSitePatterns-Sugar transport proteins signature 1.-PS00216,ProSiteProfiles-Major facilitator superfamily (MFS) profile.-PS50850,SUPERFAMILY--SSF103473, at 689,147 to 690,940 8658
Group Condition mRNA_286 mRNA_287 mRNA_288 mRNA_289 mRNA_290
8654 8655 8656 8657 8658
ypd buoyancy 40 hrs No Buoyancy Separation -0.5 N.D. -0.9 -0.1 +0.3
facs on lipid accumulation Sorted Low BODIPY Gate -0.1 N.D. -0.5 +0.0 -0.0
ypd buoyancy 40 hrs Median Buoyancy -0.2 N.D. -0.3 +0.3 -0.1
facs on lipid accumulation Sorted High BODIPY Gate -0.5 N.D. +0.0 -0.2 +0.4
facs on lipid accumulation Sorted No BODIPY Gate -0.3 N.D. -0.3 -0.1 +0.5
ypd buoyancy 40 hrs High Buoyancy +0.2 N.D. -0.3 +0.1 -0.2
growth on oleic acid YNB Glucose -0.1 N.D. -0.0 +0.1 -0.1
ypd buoyancy 40 hrs Low Buoyancy +0.1 N.D. -0.3 +0.2 -0.3
growth on ricinoleic acid YNB Methylricinoleic Acid +0.1 N.D. -0.3 +0.1 +0.2
buoyancy on lipid accumulation 40 hrs High Buoyancy -0.1 N.D. +0.1 +0.2 -0.0
buoyancy on lipid accumulation 40 hrs Low Buoyancy +0.7 N.D. -0.3 -0.2 -0.0
growth on oleic acid YNB Oleic Acid +0.3 N.D. +0.1 -0.1 +0.0
growth on ypd YPD -0.1 N.D. +0.3 -0.0 +0.1
buoyancy on lipid accumulation 40 hrs Median Buoyancy +0.4 N.D. -0.0 +0.1 -0.2
auxotrophy Dropout Complete +0.2 N.D. +0.3 -0.1 +0.0
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation +0.8 N.D. -0.0 +0.0 -0.3
auxotrophy YNB Glucose +0.1 N.D. +0.2 +0.3 -0.0
auxotrophy YNB Glucose 75mM Arginine +0.2 N.D. +0.1 +0.2 +0.2
auxotrophy YNB Glucose 75mM Methionine +0.3 N.D. +0.2 +0.1 +0.2
growth on ricinoleic acid YNB Glucose +0.8 N.D. -0.1 -0.2 +0.4
growth on ricinoleic acid YNB Ricinoleic Acid +0.6 N.D. +0.2 -0.0 +0.4
remove
mRNA_286
plot
remove
mRNA_287
plot
remove
mRNA_288
remove
mRNA_289
plot
remove
mRNA_290
plot