Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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500 nt 8656 and 8657 are separated by 136 nucleotides8657 and 8658 are separated by 358 nucleotides8658 and 8659 are separated by 570 nucleotides8659 and 8660 are separated by 162 nucleotides mRNA_288: 8656 - K00521 E1.16.1.7 ferric-chelate reductase, at 684,049 to 686,611 8656 mRNA_289: 8657 - HMMPfam-Major Facilitator Superfamily-PF07690,ProSiteProfiles-Major facilitator superfamily (MFS) profile.-PS50850,SUPERFAMILY--SSF103473, at 686,748 to 688,788 8657 mRNA_290: 8658 - HMMPfam-Major Facilitator Superfamily-PF07690,ProSitePatterns-Sugar transport proteins signature 1.-PS00216,ProSiteProfiles-Major facilitator superfamily (MFS) profile.-PS50850,SUPERFAMILY--SSF103473, at 689,147 to 690,940 8658 mRNA_291: 8659 - K03012 RPB4, POLR2D DNA-directed RNA polymerase II subunit RPB4, at 691,511 to 692,003 8659 mRNA_292: 8660 - HMMPfam-Endoplasmic reticulum-based factor for assembly of V-ATPase-PF11712, at 692,166 to 693,130 8660
Group Condition mRNA_288 mRNA_289 mRNA_290 mRNA_291 mRNA_292
8656 8657 8658 8659 8660
ypd buoyancy 40 hrs No Buoyancy Separation -0.9 -0.1 +0.3 N.D. N.D.
buoyancy on lipid accumulation 40 hrs Low Buoyancy -0.3 -0.2 -0.0 N.D. N.D.
facs on lipid accumulation Sorted Low BODIPY Gate -0.5 +0.0 -0.0 N.D. N.D.
ypd buoyancy 40 hrs High Buoyancy -0.3 +0.1 -0.2 N.D. N.D.
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation -0.0 +0.0 -0.3 N.D. N.D.
ypd buoyancy 40 hrs Low Buoyancy -0.3 +0.2 -0.3 N.D. N.D.
ypd buoyancy 40 hrs Median Buoyancy -0.3 +0.3 -0.1 N.D. N.D.
buoyancy on lipid accumulation 40 hrs Median Buoyancy -0.0 +0.1 -0.2 N.D. N.D.
growth on oleic acid YNB Glucose -0.0 +0.1 -0.1 N.D. N.D.
growth on ricinoleic acid YNB Methylricinoleic Acid -0.3 +0.1 +0.2 N.D. N.D.
growth on oleic acid YNB Oleic Acid +0.1 -0.1 +0.0 N.D. N.D.
facs on lipid accumulation Sorted No BODIPY Gate -0.3 -0.1 +0.5 N.D. N.D.
growth on ricinoleic acid YNB Glucose -0.1 -0.2 +0.4 N.D. N.D.
facs on lipid accumulation Sorted High BODIPY Gate +0.0 -0.2 +0.4 N.D. N.D.
buoyancy on lipid accumulation 40 hrs High Buoyancy +0.1 +0.2 -0.0 N.D. N.D.
auxotrophy Dropout Complete +0.3 -0.1 +0.0 N.D. N.D.
growth on ypd YPD +0.3 -0.0 +0.1 N.D. N.D.
auxotrophy YNB Glucose +0.2 +0.3 -0.0 N.D. N.D.
auxotrophy YNB Glucose 75mM Methionine +0.2 +0.1 +0.2 N.D. N.D.
auxotrophy YNB Glucose 75mM Arginine +0.1 +0.2 +0.2 N.D. N.D.
growth on ricinoleic acid YNB Ricinoleic Acid +0.2 -0.0 +0.4 N.D. N.D.
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