Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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500 nt 8663 and 8664 are separated by 125 nucleotides8664 and 8665 are separated by 315 nucleotides8665 and 8666 are separated by 2623 nucleotides8666 and 8667 are separated by 238 nucleotides mRNA_295: 8663 - KOG3069 Peroxisomal NUDIX hydrolase, at 696,083 to 698,097 8663 mRNA_296: 8664 - K20177 VPS3, TGFBRAP1 vacuolar protein sorting-associated protein 3, at 698,223 to 702,275 8664 mRNA_297: 8665 - Hypothetical Protein, at 702,591 to 702,936 8665 mRNA_298: 8666 - KOG0725 Reductases with broad range of substrate specificities, at 705,560 to 707,244 8666 mRNA_299: 8667 - ProSiteProfiles-SET domain profile.-PS50280,SUPERFAMILY--SSF82199, at 707,483 to 708,587 8667
Group Condition mRNA_295 mRNA_296 mRNA_297 mRNA_298 mRNA_299
8663 8664 8665 8666 8667
growth on ricinoleic acid YNB Ricinoleic Acid -0.7 -2.0 +0.3 -0.3 -4.8
growth on ricinoleic acid YNB Methylricinoleic Acid -0.4 -1.3 +0.4 -0.3 -4.2
facs on lipid accumulation Sorted No BODIPY Gate -0.0 -5.3 -0.3 +0.1 +0.2
facs on lipid accumulation Sorted Low BODIPY Gate +0.3 -5.1 -0.5 +0.1 +0.0
facs on lipid accumulation Sorted High BODIPY Gate -0.1 -4.9 +0.0 -0.1 +0.1
growth on oleic acid YNB Oleic Acid +0.2 -1.0 +0.5 -0.0 -2.3
growth on oleic acid YNB Glucose +0.2 -1.2 +0.3 +0.1 -0.8
buoyancy on lipid accumulation 40 hrs Median Buoyancy -0.4 -0.5 -0.0 +0.2 -0.3
auxotrophy YNB Glucose -0.1 -1.1 +0.3 +0.4 -0.4
buoyancy on lipid accumulation 40 hrs High Buoyancy -0.4 -0.8 -0.1 +0.4 +0.1
auxotrophy YNB Glucose 75mM Arginine -0.3 -0.6 +0.2 +0.4 -0.3
auxotrophy Dropout Complete -0.5 -0.6 +0.2 +0.3 -0.0
ypd buoyancy 40 hrs No Buoyancy Separation -0.1 +0.7 -0.3 -0.4 -0.2
ypd buoyancy 40 hrs High Buoyancy -0.1 -0.1 -0.1 -0.1 +0.2
growth on ricinoleic acid YNB Glucose -0.1 +0.4 +0.3 -0.1 -0.5
ypd buoyancy 40 hrs Median Buoyancy -0.1 +0.7 +0.0 -0.3 -0.3
auxotrophy YNB Glucose 75mM Methionine -0.1 -0.7 +0.5 +0.4 -0.0
ypd buoyancy 40 hrs Low Buoyancy +0.1 +0.6 -0.2 -0.1 -0.1
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation -0.2 +0.1 +0.2 +0.3 +0.0
buoyancy on lipid accumulation 40 hrs Low Buoyancy -0.0 +0.3 -0.2 +0.1 +0.6
growth on ypd YPD +0.1 +0.5 +0.4 -0.0 +0.1
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