Fitness for 5 genes in Rhodosporidium toruloides IFO0880

Add gene:

Number of genes on each side:  

Top 21 experiments (either direction), sorted by average fitness

Or view all 21 experiments or choose conditions or try the comparative fitness browser

500 nt 8664 and 8665 are separated by 315 nucleotides8665 and 8666 are separated by 2623 nucleotides8666 and 8667 are separated by 238 nucleotides8667 and 8668 are separated by 635 nucleotides mRNA_296: 8664 - K20177 VPS3, TGFBRAP1 vacuolar protein sorting-associated protein 3, at 698,223 to 702,275 8664 mRNA_297: 8665 - Hypothetical Protein, at 702,591 to 702,936 8665 mRNA_298: 8666 - KOG0725 Reductases with broad range of substrate specificities, at 705,560 to 707,244 8666 mRNA_299: 8667 - ProSiteProfiles-SET domain profile.-PS50280,SUPERFAMILY--SSF82199, at 707,483 to 708,587 8667 mRNA_300: 8668 - BLAST transcription factor hoxa13 [Aspergillus bombycis], at 709,223 to 712,870 8668
Group Condition mRNA_296 mRNA_297 mRNA_298 mRNA_299 mRNA_300
8664 8665 8666 8667 8668
growth on ricinoleic acid YNB Ricinoleic Acid -2.0 +0.3 -0.3 -4.8 +0.2
growth on ricinoleic acid YNB Methylricinoleic Acid -1.3 +0.4 -0.3 -4.2 -0.0
facs on lipid accumulation Sorted Low BODIPY Gate -5.1 -0.5 +0.1 +0.0 +0.1
facs on lipid accumulation Sorted High BODIPY Gate -4.9 +0.0 -0.1 +0.1 -0.3
facs on lipid accumulation Sorted No BODIPY Gate -5.3 -0.3 +0.1 +0.2 +0.1
growth on oleic acid YNB Oleic Acid -1.0 +0.5 -0.0 -2.3 -0.3
growth on oleic acid YNB Glucose -1.2 +0.3 +0.1 -0.8 -0.0
ypd buoyancy 40 hrs No Buoyancy Separation +0.7 -0.3 -0.4 -0.2 -1.4
auxotrophy YNB Glucose -1.1 +0.3 +0.4 -0.4 -0.2
buoyancy on lipid accumulation 40 hrs Median Buoyancy -0.5 -0.0 +0.2 -0.3 +0.1
auxotrophy YNB Glucose 75mM Arginine -0.6 +0.2 +0.4 -0.3 -0.3
ypd buoyancy 40 hrs High Buoyancy -0.1 -0.1 -0.1 +0.2 -0.5
buoyancy on lipid accumulation 40 hrs High Buoyancy -0.8 -0.1 +0.4 +0.1 -0.0
auxotrophy Dropout Complete -0.6 +0.2 +0.3 -0.0 -0.3
ypd buoyancy 40 hrs Low Buoyancy +0.6 -0.2 -0.1 -0.1 -0.5
ypd buoyancy 40 hrs Median Buoyancy +0.7 +0.0 -0.3 -0.3 -0.3
growth on ricinoleic acid YNB Glucose +0.4 +0.3 -0.1 -0.5 -0.2
auxotrophy YNB Glucose 75mM Methionine -0.7 +0.5 +0.4 -0.0 -0.2
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation +0.1 +0.2 +0.3 +0.0 +0.2
growth on ypd YPD +0.5 +0.4 -0.0 +0.1 +0.1
buoyancy on lipid accumulation 40 hrs Low Buoyancy +0.3 -0.2 +0.1 +0.6 +0.3
remove
mRNA_296
plot
remove
mRNA_297
plot
remove
mRNA_298
remove
mRNA_299
plot
remove
mRNA_300
plot