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Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
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Top 21 experiments (either direction), sorted by average fitness
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500 nt
8669 and 8670 are separated by 1009 nucleotides
8670 and 8671 are separated by 717 nucleotides
8671 and 8672 are separated by 306 nucleotides
8672 and 8673 are separated by 1033 nucleotides
mRNA_301: 8669 - Hypothetical Protein, at 715,492 to 716,127
8669
mRNA_302: 8670 - K00668 FAS1 fatty acid synthase subunit beta, fungi type, at 717,137 to 721,125
8670
mRNA_303: 8671 - K00222 TM7SF2, ERG24 Delta14-sterol reductase, at 721,843 to 723,815
8671
mRNA_304: 8672 - HMMPfam-Domain of unknown function (DUF1917)-PF08939,SUPERFAMILY--SSF55418, at 724,122 to 725,231
8672
mRNA_305: 8673 - HMMPfam-Peroxisomal biogenesis factor 11 (PEX11)-PF05648, at 726,265 to 727,388
8673
Group
Condition
mRNA
_301
mRNA
_302
mRNA
_303
mRNA
_304
mRNA
_305
8669
8670
8671
8672
8673
growth on ricinoleic acid
YNB Ricinoleic Acid
-0.8
N.D.
N.D.
-0.3
-4.0
growth on ricinoleic acid
YNB Methylricinoleic Acid
-0.4
N.D.
N.D.
-0.1
-3.5
growth on oleic acid
YNB Oleic Acid
+0.4
N.D.
N.D.
+0.0
-1.8
facs on lipid accumulation
Sorted Low BODIPY Gate
+0.0
N.D.
N.D.
+0.1
-0.9
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
+0.7
N.D.
N.D.
-1.0
-0.4
buoyancy on lipid accumulation
40 hrs Median Buoyancy
+0.4
N.D.
N.D.
-0.7
-0.4
ypd buoyancy
40 hrs No Buoyancy Separation
-0.3
N.D.
N.D.
-0.2
-0.2
ypd buoyancy
40 hrs Low Buoyancy
-0.5
N.D.
N.D.
+0.3
-0.4
growth on ricinoleic acid
YNB Glucose
-0.2
N.D.
N.D.
+0.1
-0.5
facs on lipid accumulation
Sorted No BODIPY Gate
+0.2
N.D.
N.D.
+0.3
-0.8
auxotrophy
YNB Glucose 75mM Arginine
-0.0
N.D.
N.D.
-0.4
+0.1
facs on lipid accumulation
Sorted High BODIPY Gate
+0.4
N.D.
N.D.
-0.1
-0.6
auxotrophy
Dropout Complete
-0.4
N.D.
N.D.
-0.2
+0.5
auxotrophy
YNB Glucose
-0.3
N.D.
N.D.
+0.0
+0.2
ypd buoyancy
40 hrs Median Buoyancy
-0.3
N.D.
N.D.
+0.5
-0.3
buoyancy on lipid accumulation
40 hrs Low Buoyancy
+0.3
N.D.
N.D.
-0.4
+0.1
ypd buoyancy
40 hrs High Buoyancy
+0.0
N.D.
N.D.
+0.5
-0.2
growth on oleic acid
YNB Glucose
+0.2
N.D.
N.D.
-0.1
+0.2
buoyancy on lipid accumulation
40 hrs High Buoyancy
+0.7
N.D.
N.D.
-0.2
-0.1
growth on ypd
YPD
-0.3
N.D.
N.D.
+0.6
+0.3
auxotrophy
YNB Glucose 75mM Methionine
+0.0
N.D.
N.D.
+0.2
+0.3
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