Fitness for 5 genes in Rhodosporidium toruloides IFO0880

Add gene:

Number of genes on each side:  

Top 21 experiments (either direction), sorted by average fitness

Or view all 21 experiments or choose conditions or try the comparative fitness browser

500 nt 8679 and 8680 are separated by 283 nucleotides8680 and 8681 are separated by 248 nucleotides8681 and 8682 are separated by 296 nucleotides8682 and 8683 are separated by 224 nucleotides mRNA_311: 8679 - KOG1001 Helicase-like transcription factor HLTF/DNA helicase RAD5, DEAD-box superfamily, at 737,521 to 741,046 8679 mRNA_312: 8680 - K20103 DDX60 ATP-dependent RNA helicase DDX60, at 741,330 to 747,566 8680 mRNA_313: 8681 - Hypothetical Protein, at 747,815 to 749,312 8681 mRNA_314: 8682 - K13091 RBM39, RNPC2 RNA-binding protein 39, at 749,609 to 751,814 8682 mRNA_315: 8683 - Hypothetical Protein, at 752,039 to 753,953 8683
Group Condition mRNA_311 mRNA_312 mRNA_313 mRNA_314 mRNA_315
8679 8680 8681 8682 8683
growth on oleic acid YNB Oleic Acid -0.2 N.D. -3.3 N.D. +0.0
auxotrophy YNB Glucose 75mM Methionine -0.2 N.D. -3.3 N.D. +0.2
auxotrophy YNB Glucose 75mM Arginine -0.1 N.D. -3.2 N.D. +0.2
growth on oleic acid YNB Glucose -0.3 N.D. -2.7 N.D. +0.0
auxotrophy YNB Glucose -0.2 N.D. -2.5 N.D. +0.4
growth on ricinoleic acid YNB Glucose -0.2 N.D. -2.1 N.D. +0.3
growth on ricinoleic acid YNB Methylricinoleic Acid -0.3 N.D. -1.5 N.D. -0.0
growth on ypd YPD -0.4 N.D. -1.4 N.D. +0.1
ypd buoyancy 40 hrs Low Buoyancy -0.0 N.D. -1.8 N.D. +0.1
growth on ricinoleic acid YNB Ricinoleic Acid -0.3 N.D. -1.1 N.D. +0.1
buoyancy on lipid accumulation 40 hrs Low Buoyancy -0.2 N.D. -0.5 N.D. -0.1
facs on lipid accumulation Sorted No BODIPY Gate +0.1 N.D. -0.7 N.D. -0.1
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation -0.1 N.D. -0.4 N.D. -0.1
auxotrophy Dropout Complete -0.3 N.D. -0.3 N.D. +0.1
facs on lipid accumulation Sorted Low BODIPY Gate +0.3 N.D. -0.2 N.D. -0.3
buoyancy on lipid accumulation 40 hrs Median Buoyancy -0.0 N.D. -0.0 N.D. -0.1
ypd buoyancy 40 hrs No Buoyancy Separation -0.2 N.D. +0.2 N.D. -0.1
facs on lipid accumulation Sorted High BODIPY Gate +0.3 N.D. -0.3 N.D. -0.1
ypd buoyancy 40 hrs High Buoyancy -0.0 N.D. +0.4 N.D. -0.0
ypd buoyancy 40 hrs Median Buoyancy -0.1 N.D. +0.3 N.D. +0.2
buoyancy on lipid accumulation 40 hrs High Buoyancy -0.1 N.D. +0.9 N.D. +0.0
remove
mRNA_311
plot		 remove
mRNA_312
plot		 remove
mRNA_313		 remove
mRNA_314
plot		 remove
mRNA_315
plot