Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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500 nt 8682 and 8683 are separated by 224 nucleotides8683 and 8684 are separated by 321 nucleotides8684 and 8685 are separated by 201 nucleotides8685 and 8686 are separated by 81 nucleotides mRNA_314: 8682 - K13091 RBM39, RNPC2 RNA-binding protein 39, at 749,609 to 751,814 8682 mRNA_315: 8683 - Hypothetical Protein, at 752,039 to 753,953 8683 mRNA_316: 8684 - K18802 DUG3 glutamine amidotransferase, at 754,275 to 756,026 8684 mRNA_317: 8685 - HMMPfam-DnaJ domain-PF00226,PRINTS-DnaJ domain signature-PR00625,ProSitePatterns-Nt-dnaJ domain signature.-PS00636,ProSiteProfiles-dnaJ domain profile.-PS50076,ProSiteProfiles-IQ motif profile.-PS50096,SMART-DnaJ molecular chaperone homology domain-SM00271,SUPERFAMILY--SSF46565, at 756,228 to 757,512 8685 mRNA_318: 8686 - Interpro Fungal domain of unknown function (DUF1750), at 757,594 to 759,249 8686
Group Condition mRNA_314 mRNA_315 mRNA_316 mRNA_317 mRNA_318
8682 8683 8684 8685 8686
facs on lipid accumulation Sorted Low BODIPY Gate N.D. -0.3 -0.5 -0.4 -1.5
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation N.D. -0.1 -0.1 -0.6 -1.3
buoyancy on lipid accumulation 40 hrs Low Buoyancy N.D. -0.1 -0.4 -0.0 -1.3
facs on lipid accumulation Sorted High BODIPY Gate N.D. -0.1 -0.4 -0.1 -1.3
ypd buoyancy 40 hrs No Buoyancy Separation N.D. -0.1 +0.2 -0.0 -1.8
facs on lipid accumulation Sorted No BODIPY Gate N.D. -0.1 -0.2 -0.1 -0.9
buoyancy on lipid accumulation 40 hrs Median Buoyancy N.D. -0.1 +0.1 -0.4 -0.6
buoyancy on lipid accumulation 40 hrs High Buoyancy N.D. +0.0 +0.1 -0.2 -0.8
growth on ricinoleic acid YNB Glucose N.D. +0.3 -0.3 +0.3 -0.6
growth on ricinoleic acid YNB Methylricinoleic Acid N.D. -0.0 -0.2 +0.1 -0.2
ypd buoyancy 40 hrs High Buoyancy N.D. -0.0 +0.0 -0.2 +0.2
ypd buoyancy 40 hrs Median Buoyancy N.D. +0.2 +0.1 -0.0 -0.0
ypd buoyancy 40 hrs Low Buoyancy N.D. +0.1 +0.2 -0.0 +0.0
growth on ricinoleic acid YNB Ricinoleic Acid N.D. +0.1 -0.1 +0.5 -0.1
growth on oleic acid YNB Oleic Acid N.D. +0.0 -0.0 -0.0 +0.5
auxotrophy Dropout Complete N.D. +0.1 +0.7 +0.2 -0.3
growth on oleic acid YNB Glucose N.D. +0.0 +0.4 -0.1 +0.5
auxotrophy YNB Glucose 75mM Methionine N.D. +0.2 +0.4 +0.3 -0.1
auxotrophy YNB Glucose N.D. +0.4 +0.6 +0.1 -0.2
growth on ypd YPD N.D. +0.1 -0.0 +0.4 +0.5
auxotrophy YNB Glucose 75mM Arginine N.D. +0.2 +0.4 +0.6 +0.9
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