Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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500 nt 8684 and 8685 are separated by 201 nucleotides8685 and 8686 are separated by 81 nucleotides8686 and 8687 are separated by 85 nucleotides8687 and 8688 are separated by 118 nucleotides mRNA_316: 8684 - K18802 DUG3 glutamine amidotransferase, at 754,275 to 756,026 8684 mRNA_317: 8685 - HMMPfam-DnaJ domain-PF00226,PRINTS-DnaJ domain signature-PR00625,ProSitePatterns-Nt-dnaJ domain signature.-PS00636,ProSiteProfiles-dnaJ domain profile.-PS50076,ProSiteProfiles-IQ motif profile.-PS50096,SMART-DnaJ molecular chaperone homology domain-SM00271,SUPERFAMILY--SSF46565, at 756,228 to 757,512 8685 mRNA_318: 8686 - Interpro Fungal domain of unknown function (DUF1750), at 757,594 to 759,249 8686 mRNA_319: 8687 - KOG2134 Polynucleotide kinase 3' phosphatase, at 759,335 to 760,537 8687 mRNA_320: 8688 - Hypothetical Protein, at 760,656 to 762,781 8688
Group Condition mRNA_316 mRNA_317 mRNA_318 mRNA_319 mRNA_320
8684 8685 8686 8687 8688
facs on lipid accumulation Sorted Low BODIPY Gate -0.5 -0.4 -1.5 -0.5 -0.4
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation -0.1 -0.6 -1.3 +0.2 -0.6
buoyancy on lipid accumulation 40 hrs Low Buoyancy -0.4 -0.0 -1.3 +0.4 -0.2
facs on lipid accumulation Sorted No BODIPY Gate -0.2 -0.1 -0.9 -0.3 +0.1
ypd buoyancy 40 hrs No Buoyancy Separation +0.2 -0.0 -1.8 +0.2 -0.0
facs on lipid accumulation Sorted High BODIPY Gate -0.4 -0.1 -1.3 +0.3 +0.1
growth on ricinoleic acid YNB Glucose -0.3 +0.3 -0.6 -0.6 +0.4
buoyancy on lipid accumulation 40 hrs High Buoyancy +0.1 -0.2 -0.8 +0.6 -0.3
buoyancy on lipid accumulation 40 hrs Median Buoyancy +0.1 -0.4 -0.6 +0.6 -0.3
growth on ricinoleic acid YNB Methylricinoleic Acid -0.2 +0.1 -0.2 -0.3 +0.3
ypd buoyancy 40 hrs High Buoyancy +0.0 -0.2 +0.2 -0.3 +0.4
growth on ypd YPD -0.0 +0.4 +0.5 -0.3 -0.5
ypd buoyancy 40 hrs Median Buoyancy +0.1 -0.0 -0.0 +0.1 +0.1
auxotrophy YNB Glucose 75mM Methionine +0.4 +0.3 -0.1 -0.5 +0.3
growth on oleic acid YNB Oleic Acid -0.0 -0.0 +0.5 -0.3 +0.4
growth on ricinoleic acid YNB Ricinoleic Acid -0.1 +0.5 -0.1 -0.1 +0.3
ypd buoyancy 40 hrs Low Buoyancy +0.2 -0.0 +0.0 +0.2 +0.3
auxotrophy Dropout Complete +0.7 +0.2 -0.3 -0.4 +0.6
auxotrophy YNB Glucose +0.6 +0.1 -0.2 -0.3 +0.6
growth on oleic acid YNB Glucose +0.4 -0.1 +0.5 +0.0 +0.2
auxotrophy YNB Glucose 75mM Arginine +0.4 +0.6 +0.9 -0.6 +0.4
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