Fitness for 5 genes in Rhodosporidium toruloides IFO0880

Add gene:

Number of genes on each side:  

Top 21 experiments (either direction), sorted by average fitness

Or view all 21 experiments or choose conditions or try the comparative fitness browser

500 nt 8687 and 8688 are separated by 118 nucleotides8688 and 8689 are separated by 57 nucleotides8689 and 8690 are separated by 175 nucleotides8690 and 8691 are separated by 518 nucleotides mRNA_319: 8687 - KOG2134 Polynucleotide kinase 3' phosphatase, at 759,335 to 760,537 8687 mRNA_320: 8688 - Hypothetical Protein, at 760,656 to 762,781 8688 mRNA_321: 8689 - KOG4317 Predicted Zn-finger protein, at 762,839 to 764,616 8689 mRNA_322: 8690 - Hypothetical Protein, at 764,792 to 765,740 8690 mRNA_323: 8691 - Hypothetical Protein, at 766,259 to 767,210 8691
Group Condition mRNA_319 mRNA_320 mRNA_321 mRNA_322 mRNA_323
8687 8688 8689 8690 8691
facs on lipid accumulation Sorted Low BODIPY Gate -0.5 -0.4 N.D. -0.2 +0.3
facs on lipid accumulation Sorted High BODIPY Gate +0.3 +0.1 N.D. -0.6 -0.7
buoyancy on lipid accumulation 40 hrs Low Buoyancy +0.4 -0.2 N.D. -0.4 -0.1
growth on ricinoleic acid YNB Glucose -0.6 +0.4 N.D. -0.2 -0.0
buoyancy on lipid accumulation 40 hrs High Buoyancy +0.6 -0.3 N.D. -0.4 -0.2
growth on oleic acid YNB Oleic Acid -0.3 +0.4 N.D. -0.5 +0.2
ypd buoyancy 40 hrs No Buoyancy Separation +0.2 -0.0 N.D. +0.9 -1.4
buoyancy on lipid accumulation 40 hrs Median Buoyancy +0.6 -0.3 N.D. -0.4 -0.1
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation +0.2 -0.6 N.D. +0.1 +0.1
growth on ypd YPD -0.3 -0.5 N.D. -0.0 +0.7
facs on lipid accumulation Sorted No BODIPY Gate -0.3 +0.1 N.D. -0.1 +0.3
growth on ricinoleic acid YNB Methylricinoleic Acid -0.3 +0.3 N.D. -0.1 -0.0
auxotrophy YNB Glucose 75mM Arginine -0.6 +0.4 N.D. +0.0 +0.3
auxotrophy YNB Glucose 75mM Methionine -0.5 +0.3 N.D. +0.2 +0.1
growth on ricinoleic acid YNB Ricinoleic Acid -0.1 +0.3 N.D. +0.2 -0.0
auxotrophy Dropout Complete -0.4 +0.6 N.D. +0.1 +0.1
ypd buoyancy 40 hrs Median Buoyancy +0.1 +0.1 N.D. +0.3 +0.0
ypd buoyancy 40 hrs High Buoyancy -0.3 +0.4 N.D. +0.8 -0.3
growth on oleic acid YNB Glucose +0.0 +0.2 N.D. +0.2 +0.2
auxotrophy YNB Glucose -0.3 +0.6 N.D. +0.3 +0.4
ypd buoyancy 40 hrs Low Buoyancy +0.2 +0.3 N.D. +0.6 -0.1
remove
mRNA_319
plot
remove
mRNA_320
plot
remove
mRNA_321
remove
mRNA_322
plot
remove
mRNA_323
plot