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Protein
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Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
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Top 21 experiments (either direction), sorted by average fitness
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500 nt
8689 and 8690 are separated by 175 nucleotides
8690 and 8691 are separated by 518 nucleotides
8691 and 8692 are separated by 647 nucleotides
8692 and 8693 are separated by 306 nucleotides
mRNA_321: 8689 - KOG4317 Predicted Zn-finger protein, at 762,839 to 764,616
8689
mRNA_322: 8690 - Hypothetical Protein, at 764,792 to 765,740
8690
mRNA_323: 8691 - Hypothetical Protein, at 766,259 to 767,210
8691
mRNA_324: 8692 - K00135 gabD succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase, at 767,858 to 770,027
8692
mRNA_325: 8693 - KOG0054 Multidrug resistance-associated protein/mitoxantrone resistance protein, ABC superfamily, at 770,334 to 776,057
8693
Group
Condition
mRNA
_321
mRNA
_322
mRNA
_323
mRNA
_324
mRNA
_325
8689
8690
8691
8692
8693
facs on lipid accumulation
Sorted High BODIPY Gate
N.D.
-0.6
-0.7
-0.7
-0.1
buoyancy on lipid accumulation
40 hrs High Buoyancy
N.D.
-0.4
-0.2
-0.2
-0.1
facs on lipid accumulation
Sorted Low BODIPY Gate
N.D.
-0.2
+0.3
-0.7
-0.1
ypd buoyancy
40 hrs No Buoyancy Separation
N.D.
+0.9
-1.4
-0.1
-0.3
growth on oleic acid
YNB Oleic Acid
N.D.
-0.5
+0.2
-0.4
+0.0
growth on ricinoleic acid
YNB Methylricinoleic Acid
N.D.
-0.1
-0.0
-0.4
+0.0
growth on ricinoleic acid
YNB Ricinoleic Acid
N.D.
+0.2
-0.0
-0.9
+0.3
buoyancy on lipid accumulation
40 hrs Low Buoyancy
N.D.
-0.4
-0.1
+0.3
-0.1
growth on oleic acid
YNB Glucose
N.D.
+0.2
+0.2
-0.6
-0.1
facs on lipid accumulation
Sorted No BODIPY Gate
N.D.
-0.1
+0.3
-0.4
-0.1
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
N.D.
+0.1
+0.1
-0.3
-0.1
growth on ricinoleic acid
YNB Glucose
N.D.
-0.2
-0.0
-0.1
+0.1
buoyancy on lipid accumulation
40 hrs Median Buoyancy
N.D.
-0.4
-0.1
+0.2
+0.1
ypd buoyancy
40 hrs Low Buoyancy
N.D.
+0.6
-0.1
-0.2
-0.3
auxotrophy
YNB Glucose 75mM Methionine
N.D.
+0.2
+0.1
-0.3
+0.2
auxotrophy
Dropout Complete
N.D.
+0.1
+0.1
-0.1
+0.2
ypd buoyancy
40 hrs Median Buoyancy
N.D.
+0.3
+0.0
+0.1
-0.1
auxotrophy
YNB Glucose 75mM Arginine
N.D.
+0.0
+0.3
-0.2
+0.2
ypd buoyancy
40 hrs High Buoyancy
N.D.
+0.8
-0.3
+0.2
-0.2
auxotrophy
YNB Glucose
N.D.
+0.3
+0.4
-0.2
+0.3
growth on ypd
YPD
N.D.
-0.0
+0.7
+0.4
-0.0
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