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Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
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Top 21 experiments (either direction), sorted by average fitness
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500 nt
8694 and 8695 are separated by 226 nucleotides
8695 and 8696 are separated by 264 nucleotides
8696 and 8697 are separated by 207 nucleotides
8697 and 8698 are separated by 625 nucleotides
mRNA_326: 8694 - K17983 SHE9 sensitive to high expression protein 9, mitochondrial, at 776,267 to 777,781
8694
mRNA_327: 8695 - KOG0378 40S ribosomal protein S4, at 778,008 to 779,249
8695
mRNA_328: 8696 - K02987 RP-S4e, RPS4 small subunit ribosomal protein S4e, at 779,514 to 780,910
8696
mRNA_329: 8697 - Hypothetical Protein, at 781,118 to 782,181
8697
mRNA_330: 8698 - KOG2018 Predicted dinucleotide-utilizing enzyme involved in molybdopterin and thiamine biosynthesis, at 782,807 to 784,581
8698
Group
Condition
mRNA
_326
mRNA
_327
mRNA
_328
mRNA
_329
mRNA
_330
8694
8695
8696
8697
8698
facs on lipid accumulation
Sorted Low BODIPY Gate
-0.1
-1.1
N.D.
-0.2
-0.5
growth on ricinoleic acid
YNB Ricinoleic Acid
-1.3
-1.3
N.D.
+0.7
+0.2
facs on lipid accumulation
Sorted High BODIPY Gate
-0.3
-0.9
N.D.
+0.4
-0.9
ypd buoyancy
40 hrs High Buoyancy
-0.3
-0.9
N.D.
-0.3
-0.2
facs on lipid accumulation
Sorted No BODIPY Gate
-1.2
-0.0
N.D.
+0.1
-0.2
ypd buoyancy
40 hrs No Buoyancy Separation
-0.3
+0.8
N.D.
-0.6
-0.5
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
-0.9
+0.5
N.D.
+0.0
-0.2
growth on ricinoleic acid
YNB Glucose
-0.7
-0.4
N.D.
+0.5
+0.2
ypd buoyancy
40 hrs Low Buoyancy
-0.3
+0.0
N.D.
+0.0
-0.1
growth on oleic acid
YNB Oleic Acid
-0.3
+0.1
N.D.
+0.4
-0.5
growth on ricinoleic acid
YNB Methylricinoleic Acid
-0.5
-0.6
N.D.
+0.6
+0.6
buoyancy on lipid accumulation
40 hrs Low Buoyancy
-0.5
+1.7
N.D.
-0.0
-1.0
ypd buoyancy
40 hrs Median Buoyancy
+0.3
-0.2
N.D.
-0.1
+0.4
growth on ypd
YPD
+1.0
-0.5
N.D.
+0.3
-0.3
buoyancy on lipid accumulation
40 hrs High Buoyancy
-0.6
+1.0
N.D.
+0.1
+0.1
buoyancy on lipid accumulation
40 hrs Median Buoyancy
-0.4
+0.8
N.D.
+0.1
+0.1
growth on oleic acid
YNB Glucose
+0.1
+0.1
N.D.
+0.2
+0.3
auxotrophy
Dropout Complete
-0.7
+1.7
N.D.
+0.1
-0.1
auxotrophy
YNB Glucose 75mM Methionine
-0.5
+1.8
N.D.
+0.3
-0.1
auxotrophy
YNB Glucose
-0.9
+2.3
N.D.
+0.3
+0.2
auxotrophy
YNB Glucose 75mM Arginine
-0.5
+2.1
N.D.
+0.2
+0.4
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