Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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500 nt 8699 and 8700 are separated by 349 nucleotides8700 and 8701 are separated by 582 nucleotides8701 and 8702 are separated by 1063 nucleotides8702 and 8703 are separated by 92 nucleotides mRNA_331: 8699 - K03940 NDUFS7 NADH dehydrogenase (ubiquinone) Fe-S protein 7, at 786,269 to 787,745 8699 mRNA_332: 8700 - HMMPfam-DSS1/SEM1 family-PF05160, at 788,095 to 788,775 8700 mRNA_333: 8701 - Hypothetical Protein, at 789,358 to 791,102 8701 mRNA_334: 8702 - K00938 E2.7.4.2, mvaK2 phosphomevalonate kinase, at 792,166 to 794,119 8702 mRNA_335: 8703 - BLAST LOC100145131 protein [Xenopus tropicalis], at 794,212 to 794,991 8703
Group Condition mRNA_331 mRNA_332 mRNA_333 mRNA_334 mRNA_335
8699 8700 8701 8702 8703
growth on ricinoleic acid YNB Methylricinoleic Acid -0.9 N.D. -0.5 N.D. N.D.
growth on oleic acid YNB Oleic Acid -0.6 N.D. -0.5 N.D. N.D.
growth on ricinoleic acid YNB Ricinoleic Acid -0.4 N.D. -0.5 N.D. N.D.
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation -0.7 N.D. -0.1 N.D. N.D.
growth on ricinoleic acid YNB Glucose -0.7 N.D. -0.1 N.D. N.D.
facs on lipid accumulation Sorted Low BODIPY Gate -0.8 N.D. +0.1 N.D. N.D.
facs on lipid accumulation Sorted No BODIPY Gate -0.6 N.D. -0.0 N.D. N.D.
buoyancy on lipid accumulation 40 hrs Median Buoyancy -0.6 N.D. -0.1 N.D. N.D.
facs on lipid accumulation Sorted High BODIPY Gate -0.7 N.D. +0.0 N.D. N.D.
growth on oleic acid YNB Glucose -0.4 N.D. -0.1 N.D. N.D.
ypd buoyancy 40 hrs Low Buoyancy -0.5 N.D. +0.1 N.D. N.D.
ypd buoyancy 40 hrs Median Buoyancy -0.4 N.D. +0.1 N.D. N.D.
buoyancy on lipid accumulation 40 hrs Low Buoyancy -0.3 N.D. +0.1 N.D. N.D.
buoyancy on lipid accumulation 40 hrs High Buoyancy -0.0 N.D. -0.1 N.D. N.D.
ypd buoyancy 40 hrs No Buoyancy Separation +0.0 N.D. +0.1 N.D. N.D.
auxotrophy YNB Glucose +0.3 N.D. -0.1 N.D. N.D.
ypd buoyancy 40 hrs High Buoyancy +0.2 N.D. +0.1 N.D. N.D.
auxotrophy Dropout Complete +0.6 N.D. -0.2 N.D. N.D.
auxotrophy YNB Glucose 75mM Arginine +0.6 N.D. +0.0 N.D. N.D.
growth on ypd YPD +0.6 N.D. +0.1 N.D. N.D.
auxotrophy YNB Glucose 75mM Methionine +0.8 N.D. +0.0 N.D. N.D.
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