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Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
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Top 21 experiments (either direction), sorted by average fitness
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500 nt
8704 and 8705 are separated by 297 nucleotides
8705 and 8706 are separated by 527 nucleotides
8706 and 8707 overlap by 4 nucleotides
8707 and 8708 are separated by 462 nucleotides
mRNA_336: 8704 - BLAST AGAP003941-PA [Anopheles gambiae str. PEST], at 795,455 to 795,670
8704
mRNA_337: 8705 - HMMPfam-Glycosyl hydrolases family 17-PF00332,SUPERFAMILY--SSF51445, at 795,968 to 797,601
8705
mRNA_338: 8706 - Hypothetical Protein, at 798,129 to 798,620
8706
mRNA_339: 8707 - K01693 hisB imidazoleglycerol-phosphate dehydratase, at 798,617 to 799,510
8707
mRNA_340: 8708 - KOG1271 Methyltransferases, at 799,973 to 801,137
8708
Group
Condition
mRNA
_336
mRNA
_337
mRNA
_338
mRNA
_339
mRNA
_340
8704
8705
8706
8707
8708
ypd buoyancy
40 hrs High Buoyancy
N.D.
-0.3
-0.4
N.D.
+0.1
facs on lipid accumulation
Sorted No BODIPY Gate
N.D.
-0.0
+0.0
N.D.
-0.6
ypd buoyancy
40 hrs Low Buoyancy
N.D.
-0.0
-0.3
N.D.
+0.0
buoyancy on lipid accumulation
40 hrs Median Buoyancy
N.D.
+0.2
-0.8
N.D.
+0.3
auxotrophy
YNB Glucose 75mM Methionine
N.D.
-0.2
+0.4
N.D.
-0.3
auxotrophy
YNB Glucose
N.D.
+0.2
+0.2
N.D.
-0.4
growth on ricinoleic acid
YNB Methylricinoleic Acid
N.D.
-0.1
+0.1
N.D.
+0.0
facs on lipid accumulation
Sorted High BODIPY Gate
N.D.
+0.4
-0.3
N.D.
-0.0
auxotrophy
Dropout Complete
N.D.
+0.2
+0.2
N.D.
-0.3
growth on ricinoleic acid
YNB Glucose
N.D.
+0.0
+0.2
N.D.
-0.1
growth on oleic acid
YNB Oleic Acid
N.D.
-0.1
-0.1
N.D.
+0.4
facs on lipid accumulation
Sorted Low BODIPY Gate
N.D.
+0.1
-0.0
N.D.
+0.1
auxotrophy
YNB Glucose 75mM Arginine
N.D.
+0.1
+0.3
N.D.
-0.2
growth on ricinoleic acid
YNB Ricinoleic Acid
N.D.
+0.3
-0.1
N.D.
+0.1
ypd buoyancy
40 hrs Median Buoyancy
N.D.
+0.1
-0.1
N.D.
+0.3
buoyancy on lipid accumulation
40 hrs High Buoyancy
N.D.
+0.1
-0.3
N.D.
+0.6
growth on oleic acid
YNB Glucose
N.D.
-0.0
+0.2
N.D.
+0.3
buoyancy on lipid accumulation
40 hrs Low Buoyancy
N.D.
+0.0
-0.2
N.D.
+0.6
ypd buoyancy
40 hrs No Buoyancy Separation
N.D.
+0.4
+0.8
N.D.
-0.3
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
N.D.
+0.3
-0.2
N.D.
+0.8
growth on ypd
YPD
N.D.
+0.6
+0.4
N.D.
+0.3
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