Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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500 nt 8706 and 8707 overlap by 4 nucleotides8707 and 8708 are separated by 462 nucleotides8708 and 8709 are separated by 188 nucleotides8709 and 8710 are separated by 268 nucleotides mRNA_338: 8706 - Hypothetical Protein, at 798,129 to 798,620 8706 mRNA_339: 8707 - K01693 hisB imidazoleglycerol-phosphate dehydratase, at 798,617 to 799,510 8707 mRNA_340: 8708 - KOG1271 Methyltransferases, at 799,973 to 801,137 8708 mRNA_341: 8709 - K00860 cysC adenylylsulfate kinase, at 801,326 to 802,147 8709 mRNA_342: 8710 - SUPERFAMILY--SSF54285, at 802,416 to 802,761 8710
Group Condition mRNA_338 mRNA_339 mRNA_340 mRNA_341 mRNA_342
8706 8707 8708 8709 8710
auxotrophy YNB Glucose +0.2 N.D. -0.4 -3.0 +0.0
auxotrophy YNB Glucose 75mM Arginine +0.3 N.D. -0.2 -3.0 +0.0
growth on ricinoleic acid YNB Glucose +0.2 N.D. -0.1 -2.8 +0.2
buoyancy on lipid accumulation 40 hrs Low Buoyancy -0.2 N.D. +0.6 -2.9 +0.0
growth on ricinoleic acid YNB Ricinoleic Acid -0.1 N.D. +0.1 -2.4 +0.1
buoyancy on lipid accumulation 40 hrs Median Buoyancy -0.8 N.D. +0.3 -1.6 -0.1
growth on ricinoleic acid YNB Methylricinoleic Acid +0.1 N.D. +0.0 -2.0 -0.1
growth on oleic acid YNB Glucose +0.2 N.D. +0.3 -2.3 +0.2
facs on lipid accumulation Sorted Low BODIPY Gate -0.0 N.D. +0.1 -1.0 -0.4
facs on lipid accumulation Sorted No BODIPY Gate +0.0 N.D. -0.6 -0.7 -0.1
ypd buoyancy 40 hrs High Buoyancy -0.4 N.D. +0.1 +0.0 -0.2
ypd buoyancy 40 hrs Low Buoyancy -0.3 N.D. +0.0 -0.0 -0.1
facs on lipid accumulation Sorted High BODIPY Gate -0.3 N.D. -0.0 +0.0 +0.0
ypd buoyancy 40 hrs No Buoyancy Separation +0.8 N.D. -0.3 -0.1 -0.6
auxotrophy Dropout Complete +0.2 N.D. -0.3 -0.1 +0.0
ypd buoyancy 40 hrs Median Buoyancy -0.1 N.D. +0.3 +0.2 -0.4
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation -0.2 N.D. +0.8 -0.5 -0.0
auxotrophy YNB Glucose 75mM Methionine +0.4 N.D. -0.3 -0.1 +0.2
growth on oleic acid YNB Oleic Acid -0.1 N.D. +0.4 -0.3 +0.3
growth on ypd YPD +0.4 N.D. +0.3 +0.1 -0.5
buoyancy on lipid accumulation 40 hrs High Buoyancy -0.3 N.D. +0.6 +1.1 -0.0
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