Fitness for 5 genes in Rhodosporidium toruloides IFO0880

Add gene:

Number of genes on each side:  

Top 21 experiments (either direction), sorted by average fitness

Or view all 21 experiments or choose conditions or try the comparative fitness browser

500 nt 8710 and 8711 are separated by 59 nucleotides8711 and 8712 are separated by 167 nucleotides8712 and 8713 are separated by 336 nucleotides8713 and 8714 are separated by 656 nucleotides mRNA_342: 8710 - SUPERFAMILY--SSF54285, at 802,416 to 802,761 8710 mRNA_343: 8711 - HMMPfam-Domain of unknown function (DUF4078)-PF13300, at 802,821 to 804,087 8711 mRNA_344: 8712 - K00914 PIK3C3, VPS34 phosphatidylinositol 3-kinase, at 804,255 to 807,496 8712 mRNA_345: 8713 - HMMPfam-Mis12-Mtw1 protein family-PF08202, at 807,833 to 810,278 8713 mRNA_346: 8714 - KOG3113 Uncharacterized conserved protein, at 810,935 to 812,073 8714
Group Condition mRNA_342 mRNA_343 mRNA_344 mRNA_345 mRNA_346
8710 8711 8712 8713 8714
facs on lipid accumulation Sorted Low BODIPY Gate -0.4 -3.0 N.D. N.D. +0.7
growth on ricinoleic acid YNB Ricinoleic Acid +0.1 -2.1 N.D. N.D. -0.1
facs on lipid accumulation Sorted High BODIPY Gate +0.0 -1.8 N.D. N.D. +0.5
ypd buoyancy 40 hrs Median Buoyancy -0.4 +0.1 N.D. N.D. -0.5
ypd buoyancy 40 hrs High Buoyancy -0.2 +0.1 N.D. N.D. -0.5
growth on ypd YPD -0.5 -0.5 N.D. N.D. +0.4
ypd buoyancy 40 hrs Low Buoyancy -0.1 -0.2 N.D. N.D. -0.2
buoyancy on lipid accumulation 40 hrs Median Buoyancy -0.1 -0.1 N.D. N.D. -0.1
growth on ricinoleic acid YNB Methylricinoleic Acid -0.1 -0.4 N.D. N.D. +0.2
ypd buoyancy 40 hrs No Buoyancy Separation -0.6 +0.3 N.D. N.D. +0.2
auxotrophy YNB Glucose 75mM Methionine +0.2 +0.4 N.D. N.D. -0.7
facs on lipid accumulation Sorted No BODIPY Gate -0.1 -0.3 N.D. N.D. +0.3
auxotrophy Dropout Complete +0.0 -0.1 N.D. N.D. +0.0
buoyancy on lipid accumulation 40 hrs Low Buoyancy +0.0 -0.1 N.D. N.D. +0.1
buoyancy on lipid accumulation 40 hrs High Buoyancy -0.0 +0.6 N.D. N.D. -0.5
auxotrophy YNB Glucose 75mM Arginine +0.0 +0.6 N.D. N.D. -0.4
growth on ricinoleic acid YNB Glucose +0.2 -0.0 N.D. N.D. +0.1
auxotrophy YNB Glucose +0.0 +0.3 N.D. N.D. +0.2
growth on oleic acid YNB Oleic Acid +0.3 +0.2 N.D. N.D. +0.4
growth on oleic acid YNB Glucose +0.2 +0.1 N.D. N.D. +0.7
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation -0.0 +0.5 N.D. N.D. +0.8
remove
mRNA_342
plot
remove
mRNA_343
plot
remove
mRNA_344
remove
mRNA_345
plot
remove
mRNA_346
plot