Fitness for 5 genes in Rhodosporidium toruloides IFO0880

Add gene:

Number of genes on each side:  

Top 21 experiments (either direction), sorted by average fitness

Or view all 21 experiments or choose conditions or try the comparative fitness browser

500 nt 8712 and 8713 are separated by 336 nucleotides8713 and 8714 are separated by 656 nucleotides8714 and 8715 are separated by 189 nucleotides8715 and 8716 are separated by 216 nucleotides mRNA_344: 8712 - K00914 PIK3C3, VPS34 phosphatidylinositol 3-kinase, at 804,255 to 807,496 8712 mRNA_345: 8713 - HMMPfam-Mis12-Mtw1 protein family-PF08202, at 807,833 to 810,278 8713 mRNA_346: 8714 - KOG3113 Uncharacterized conserved protein, at 810,935 to 812,073 8714 mRNA_347: 8715 - K01358 clpP, CLPP ATP-dependent Clp protease, protease subunit, at 812,263 to 813,594 8715 mRNA_348: 8716 - KOG0085 G protein subunit Galphaq/Galphay, small G protein superfamily, at 813,811 to 815,656 8716
Group Condition mRNA_344 mRNA_345 mRNA_346 mRNA_347 mRNA_348
8712 8713 8714 8715 8716
auxotrophy YNB Glucose 75mM Methionine N.D. N.D. -0.7 +0.1 -0.2
auxotrophy YNB Glucose 75mM Arginine N.D. N.D. -0.4 -0.3 -0.1
ypd buoyancy 40 hrs Median Buoyancy N.D. N.D. -0.5 -0.1 -0.0
ypd buoyancy 40 hrs High Buoyancy N.D. N.D. -0.5 +0.0 -0.0
auxotrophy Dropout Complete N.D. N.D. +0.0 -0.2 -0.1
ypd buoyancy 40 hrs Low Buoyancy N.D. N.D. -0.2 +0.0 -0.0
growth on ricinoleic acid YNB Methylricinoleic Acid N.D. N.D. +0.2 -0.2 -0.1
ypd buoyancy 40 hrs No Buoyancy Separation N.D. N.D. +0.2 -0.2 -0.1
auxotrophy YNB Glucose N.D. N.D. +0.2 -0.2 -0.1
buoyancy on lipid accumulation 40 hrs Median Buoyancy N.D. N.D. -0.1 +0.1 +0.2
buoyancy on lipid accumulation 40 hrs High Buoyancy N.D. N.D. -0.5 +0.2 +0.4
growth on ricinoleic acid YNB Glucose N.D. N.D. +0.1 -0.1 +0.1
facs on lipid accumulation Sorted No BODIPY Gate N.D. N.D. +0.3 -0.1 +0.0
growth on ypd YPD N.D. N.D. +0.4 +0.3 -0.3
facs on lipid accumulation Sorted High BODIPY Gate N.D. N.D. +0.5 -0.3 +0.2
growth on oleic acid YNB Oleic Acid N.D. N.D. +0.4 +0.1 +0.2
growth on ricinoleic acid YNB Ricinoleic Acid N.D. N.D. -0.1 +0.2 +0.5
facs on lipid accumulation Sorted Low BODIPY Gate N.D. N.D. +0.7 -0.1 +0.1
buoyancy on lipid accumulation 40 hrs Low Buoyancy N.D. N.D. +0.1 +0.6 +0.2
growth on oleic acid YNB Glucose N.D. N.D. +0.7 +0.2 +0.3
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation N.D. N.D. +0.8 +0.5 +0.2
remove
mRNA_344
plot
remove
mRNA_345
plot
remove
mRNA_346
remove
mRNA_347
plot
remove
mRNA_348
plot