Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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500 nt 8722 and 8723 are separated by 312 nucleotides8723 and 8724 are separated by 701 nucleotides8724 and 8725 are separated by 260 nucleotides8725 and 8726 are separated by 333 nucleotides mRNA_354: 8722 - K17583 NOM1 nucleolar MIF4G domain-containing protein 1, at 827,130 to 830,488 8722 mRNA_355: 8723 - Hypothetical Protein, at 830,801 to 831,631 8723 mRNA_356: 8724 - K02727 PSMA3 20S proteasome subunit alpha 7, at 832,333 to 833,691 8724 mRNA_357: 8725 - K01556 KYNU, kynU kynureninase, at 833,952 to 835,830 8725 mRNA_358: 8726 - KOG1515 Arylacetamide deacetylase, at 836,164 to 837,965 8726
Group Condition mRNA_354 mRNA_355 mRNA_356 mRNA_357 mRNA_358
8722 8723 8724 8725 8726
ypd buoyancy 40 hrs No Buoyancy Separation N.D. -0.5 N.D. -0.0 -2.7
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation N.D. -0.5 N.D. -1.0 -0.2
growth on ricinoleic acid YNB Methylricinoleic Acid N.D. -0.4 N.D. -0.5 -0.1
ypd buoyancy 40 hrs Median Buoyancy N.D. +0.1 N.D. -0.3 -0.6
auxotrophy Dropout Complete N.D. -0.1 N.D. -0.8 +0.1
ypd buoyancy 40 hrs Low Buoyancy N.D. -0.0 N.D. -0.4 -0.4
growth on ypd YPD N.D. -0.0 N.D. -0.1 -0.6
buoyancy on lipid accumulation 40 hrs High Buoyancy N.D. -0.2 N.D. -0.3 -0.1
ypd buoyancy 40 hrs High Buoyancy N.D. -0.0 N.D. -0.3 -0.1
buoyancy on lipid accumulation 40 hrs Low Buoyancy N.D. +0.5 N.D. -1.2 +0.4
buoyancy on lipid accumulation 40 hrs Median Buoyancy N.D. -0.0 N.D. -0.6 +0.4
auxotrophy YNB Glucose 75mM Methionine N.D. +0.1 N.D. -0.4 +0.2
growth on ricinoleic acid YNB Glucose N.D. +0.1 N.D. -0.0 -0.1
auxotrophy YNB Glucose 75mM Arginine N.D. +0.1 N.D. -0.4 +0.2
growth on ricinoleic acid YNB Ricinoleic Acid N.D. +0.2 N.D. -0.3 +0.2
growth on oleic acid YNB Glucose N.D. +0.1 N.D. +0.2 +0.1
facs on lipid accumulation Sorted No BODIPY Gate N.D. -0.1 N.D. +0.3 +0.2
growth on oleic acid YNB Oleic Acid N.D. +0.1 N.D. -0.1 +0.4
facs on lipid accumulation Sorted High BODIPY Gate N.D. -0.3 N.D. +0.4 +0.5
auxotrophy YNB Glucose N.D. +0.3 N.D. -0.1 +0.4
facs on lipid accumulation Sorted Low BODIPY Gate N.D. -0.1 N.D. +0.2 +0.6
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