Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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500 nt 8724 and 8725 are separated by 260 nucleotides8725 and 8726 are separated by 333 nucleotides8726 and 8727 are separated by 252 nucleotides8727 and 8728 are separated by 349 nucleotides mRNA_356: 8724 - K02727 PSMA3 20S proteasome subunit alpha 7, at 832,333 to 833,691 8724 mRNA_357: 8725 - K01556 KYNU, kynU kynureninase, at 833,952 to 835,830 8725 mRNA_358: 8726 - KOG1515 Arylacetamide deacetylase, at 836,164 to 837,965 8726 mRNA_359: 8727 - BLAST minor histocompatibility antigen H13 [Kwoniella d..., at 838,218 to 839,816 8727 mRNA_360: 8728 - BLAST CBN-SNA-1 protein [Caenorhabditis brenneri], at 840,166 to 840,441 8728
Group Condition mRNA_356 mRNA_357 mRNA_358 mRNA_359 mRNA_360
8724 8725 8726 8727 8728
ypd buoyancy 40 hrs No Buoyancy Separation N.D. -0.0 -2.7 -0.2 -0.6
ypd buoyancy 40 hrs Median Buoyancy N.D. -0.3 -0.6 -0.8 -0.2
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation N.D. -1.0 -0.2 -0.0 -0.2
auxotrophy Dropout Complete N.D. -0.8 +0.1 -0.3 -0.2
buoyancy on lipid accumulation 40 hrs High Buoyancy N.D. -0.3 -0.1 -0.6 -0.1
buoyancy on lipid accumulation 40 hrs Low Buoyancy N.D. -1.2 +0.4 -0.4 +0.2
ypd buoyancy 40 hrs Low Buoyancy N.D. -0.4 -0.4 +0.1 -0.3
ypd buoyancy 40 hrs High Buoyancy N.D. -0.3 -0.1 +0.0 -0.4
growth on ricinoleic acid YNB Methylricinoleic Acid N.D. -0.5 -0.1 -0.1 +0.0
facs on lipid accumulation Sorted No BODIPY Gate N.D. +0.3 +0.2 -0.9 -0.2
auxotrophy YNB Glucose 75mM Methionine N.D. -0.4 +0.2 -0.6 +0.3
auxotrophy YNB Glucose 75mM Arginine N.D. -0.4 +0.2 -0.3 -0.0
growth on ypd YPD N.D. -0.1 -0.6 -0.1 +0.3
buoyancy on lipid accumulation 40 hrs Median Buoyancy N.D. -0.6 +0.4 -0.3 +0.0
growth on ricinoleic acid YNB Ricinoleic Acid N.D. -0.3 +0.2 -0.4 +0.2
facs on lipid accumulation Sorted High BODIPY Gate N.D. +0.4 +0.5 -1.2 +0.0
growth on ricinoleic acid YNB Glucose N.D. -0.0 -0.1 -0.1 +0.1
auxotrophy YNB Glucose N.D. -0.1 +0.4 -0.5 +0.0
facs on lipid accumulation Sorted Low BODIPY Gate N.D. +0.2 +0.6 -0.8 -0.1
growth on oleic acid YNB Glucose N.D. +0.2 +0.1 +0.3 +0.1
growth on oleic acid YNB Oleic Acid N.D. -0.1 +0.4 +0.2 +0.1
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