Fitness Browser
Home
Find Gene
BLAST
Experiments
Organisms
Help
Gene
Fitness
Nearby
Cofit
Protein
Homologs
Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
Add gene:
Go
Number of genes on each side:
1
2
3
4
5
Go
Top 21 experiments (either direction), sorted by average fitness
Or view
all 21 experiments
or
choose conditions
or try the
comparative fitness browser
500 nt
8726 and 8727 are separated by 252 nucleotides
8727 and 8728 are separated by 349 nucleotides
8728 and 8729 are separated by 24 nucleotides
8729 and 8730 are separated by 1623 nucleotides
mRNA_358: 8726 - KOG1515 Arylacetamide deacetylase, at 836,164 to 837,965
8726
mRNA_359: 8727 - BLAST minor histocompatibility antigen H13 [Kwoniella d..., at 838,218 to 839,816
8727
mRNA_360: 8728 - BLAST CBN-SNA-1 protein [Caenorhabditis brenneri], at 840,166 to 840,441
8728
mRNA_361: 8729 - Hypothetical Protein, at 840,466 to 840,977
8729
mRNA_362: 8730 - HMMPfam-CENP-S associating Centromere protein X-PF09415,SUPERFAMILY--SSF47113, at 842,601 to 843,076
8730
Group
Condition
mRNA
_358
mRNA
_359
mRNA
_360
mRNA
_361
mRNA
_362
8726
8727
8728
8729
8730
ypd buoyancy
40 hrs No Buoyancy Separation
-2.7
-0.2
-0.6
N.D.
-1.6
ypd buoyancy
40 hrs Median Buoyancy
-0.6
-0.8
-0.2
N.D.
-0.1
facs on lipid accumulation
Sorted No BODIPY Gate
+0.2
-0.9
-0.2
N.D.
+0.1
ypd buoyancy
40 hrs Low Buoyancy
-0.4
+0.1
-0.3
N.D.
-0.2
auxotrophy
YNB Glucose 75mM Methionine
+0.2
-0.6
+0.3
N.D.
-0.4
auxotrophy
Dropout Complete
+0.1
-0.3
-0.2
N.D.
-0.2
auxotrophy
YNB Glucose
+0.4
-0.5
+0.0
N.D.
-0.5
facs on lipid accumulation
Sorted High BODIPY Gate
+0.5
-1.2
+0.0
N.D.
+0.2
ypd buoyancy
40 hrs High Buoyancy
-0.1
+0.0
-0.4
N.D.
+0.1
buoyancy on lipid accumulation
40 hrs High Buoyancy
-0.1
-0.6
-0.1
N.D.
+0.4
auxotrophy
YNB Glucose 75mM Arginine
+0.2
-0.3
-0.0
N.D.
-0.2
growth on ricinoleic acid
YNB Ricinoleic Acid
+0.2
-0.4
+0.2
N.D.
-0.3
facs on lipid accumulation
Sorted Low BODIPY Gate
+0.6
-0.8
-0.1
N.D.
+0.1
growth on ricinoleic acid
YNB Glucose
-0.1
-0.1
+0.1
N.D.
-0.1
growth on ypd
YPD
-0.6
-0.1
+0.3
N.D.
+0.2
growth on ricinoleic acid
YNB Methylricinoleic Acid
-0.1
-0.1
+0.0
N.D.
+0.2
growth on oleic acid
YNB Glucose
+0.1
+0.3
+0.1
N.D.
-0.3
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
-0.2
-0.0
-0.2
N.D.
+0.7
buoyancy on lipid accumulation
40 hrs Median Buoyancy
+0.4
-0.3
+0.0
N.D.
+0.6
buoyancy on lipid accumulation
40 hrs Low Buoyancy
+0.4
-0.4
+0.2
N.D.
+0.7
growth on oleic acid
YNB Oleic Acid
+0.4
+0.2
+0.1
N.D.
+0.4
remove
mRNA_358
plot
remove
mRNA_359
plot
remove
mRNA_360
remove
mRNA_361
plot
remove
mRNA_362
plot