Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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500 nt 8730 and 8731 are separated by 150 nucleotides8731 and 8732 are separated by 101 nucleotides8732 and 8733 are separated by 115 nucleotides8733 and 8734 are separated by 280 nucleotides mRNA_362: 8730 - HMMPfam-CENP-S associating Centromere protein X-PF09415,SUPERFAMILY--SSF47113, at 842,601 to 843,076 8730 mRNA_363: 8731 - K14776 DDX10, DBP4 ATP-dependent RNA helicase DDX10/DBP4, at 843,227 to 846,125 8731 mRNA_364: 8732 - KOG2498 IK cytokine down-regulator of HLA class II, at 846,227 to 847,901 8732 mRNA_365: 8733 - K17945 TPM1_2 tropomyosin, fungi type, at 848,017 to 848,980 8733 mRNA_366: 8734 - HMMPfam-Thioredoxin-like-PF13905,SUPERFAMILY--SSF52833, at 849,261 to 850,411 8734
Group Condition mRNA_362 mRNA_363 mRNA_364 mRNA_365 mRNA_366
8730 8731 8732 8733 8734
auxotrophy Dropout Complete -0.2 N.D. -0.8 N.D. -1.0
auxotrophy YNB Glucose 75mM Methionine -0.4 N.D. -0.5 N.D. -1.0
auxotrophy YNB Glucose -0.5 N.D. -0.4 N.D. -0.9
growth on ricinoleic acid YNB Glucose -0.1 N.D. -0.1 N.D. -1.5
growth on ricinoleic acid YNB Ricinoleic Acid -0.3 N.D. +0.4 N.D. -1.6
buoyancy on lipid accumulation 40 hrs Median Buoyancy +0.6 N.D. -0.2 N.D. -1.9
auxotrophy YNB Glucose 75mM Arginine -0.2 N.D. -0.4 N.D. -0.9
buoyancy on lipid accumulation 40 hrs High Buoyancy +0.4 N.D. -0.4 N.D. -1.1
ypd buoyancy 40 hrs Low Buoyancy -0.2 N.D. -0.5 N.D. -0.2
ypd buoyancy 40 hrs No Buoyancy Separation -1.6 N.D. +0.4 N.D. +0.4
growth on oleic acid YNB Glucose -0.3 N.D. -0.6 N.D. +0.1
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation +0.7 N.D. -0.3 N.D. -1.0
growth on ricinoleic acid YNB Methylricinoleic Acid +0.2 N.D. +0.4 N.D. -1.1
facs on lipid accumulation Sorted High BODIPY Gate +0.2 N.D. -0.9 N.D. +0.2
facs on lipid accumulation Sorted Low BODIPY Gate +0.1 N.D. -0.1 N.D. -0.5
growth on ypd YPD +0.2 N.D. -0.3 N.D. -0.4
ypd buoyancy 40 hrs Median Buoyancy -0.1 N.D. -0.3 N.D. +0.1
buoyancy on lipid accumulation 40 hrs Low Buoyancy +0.7 N.D. -0.6 N.D. -0.3
ypd buoyancy 40 hrs High Buoyancy +0.1 N.D. -0.2 N.D. -0.0
growth on oleic acid YNB Oleic Acid +0.4 N.D. -0.4 N.D. -0.1
facs on lipid accumulation Sorted No BODIPY Gate +0.1 N.D. +0.2 N.D. +0.3
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