Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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500 nt 8732 and 8733 are separated by 115 nucleotides8733 and 8734 are separated by 280 nucleotides8734 and 8735 are separated by 569 nucleotides8735 and 8736 are separated by 99 nucleotides mRNA_364: 8732 - KOG2498 IK cytokine down-regulator of HLA class II, at 846,227 to 847,901 8732 mRNA_365: 8733 - K17945 TPM1_2 tropomyosin, fungi type, at 848,017 to 848,980 8733 mRNA_366: 8734 - HMMPfam-Thioredoxin-like-PF13905,SUPERFAMILY--SSF52833, at 849,261 to 850,411 8734 mRNA_367: 8735 - ProSiteProfiles-TPR repeat region circular profile.-PS50293,SMART-Tetratricopeptide repeats-SM00028,SUPERFAMILY--SSF48452, at 850,981 to 853,734 8735 mRNA_368: 8736 - KOG2100 Dipeptidyl aminopeptidase, at 853,834 to 856,786 8736
Group Condition mRNA_364 mRNA_365 mRNA_366 mRNA_367 mRNA_368
8732 8733 8734 8735 8736
buoyancy on lipid accumulation 40 hrs Median Buoyancy -0.2 N.D. -1.9 -0.5 +0.2
auxotrophy Dropout Complete -0.8 N.D. -1.0 -0.1 -0.4
buoyancy on lipid accumulation 40 hrs High Buoyancy -0.4 N.D. -1.1 -0.4 +0.1
auxotrophy YNB Glucose -0.4 N.D. -0.9 -0.1 -0.3
auxotrophy YNB Glucose 75mM Arginine -0.4 N.D. -0.9 -0.0 -0.3
auxotrophy YNB Glucose 75mM Methionine -0.5 N.D. -1.0 +0.1 -0.3
growth on ricinoleic acid YNB Glucose -0.1 N.D. -1.5 +0.1 -0.0
growth on ricinoleic acid YNB Ricinoleic Acid +0.4 N.D. -1.6 -0.1 -0.1
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation -0.3 N.D. -1.0 -0.5 +0.5
buoyancy on lipid accumulation 40 hrs Low Buoyancy -0.6 N.D. -0.3 -0.5 +0.2
facs on lipid accumulation Sorted High BODIPY Gate -0.9 N.D. +0.2 +0.1 -0.3
growth on ypd YPD -0.3 N.D. -0.4 +0.2 -0.2
growth on ricinoleic acid YNB Methylricinoleic Acid +0.4 N.D. -1.1 -0.1 +0.2
facs on lipid accumulation Sorted Low BODIPY Gate -0.1 N.D. -0.5 -0.2 +0.2
growth on oleic acid YNB Glucose -0.6 N.D. +0.1 -0.1 +0.1
ypd buoyancy 40 hrs Low Buoyancy -0.5 N.D. -0.2 +0.3 -0.1
ypd buoyancy 40 hrs High Buoyancy -0.2 N.D. -0.0 +0.4 -0.3
ypd buoyancy 40 hrs Median Buoyancy -0.3 N.D. +0.1 +0.3 -0.2
growth on oleic acid YNB Oleic Acid -0.4 N.D. -0.1 +0.2 +0.2
facs on lipid accumulation Sorted No BODIPY Gate +0.2 N.D. +0.3 +0.2 -0.2
ypd buoyancy 40 hrs No Buoyancy Separation +0.4 N.D. +0.4 +0.1 +0.1
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