Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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500 nt 8733 and 8734 are separated by 280 nucleotides8734 and 8735 are separated by 569 nucleotides8735 and 8736 are separated by 99 nucleotides8736 and 8737 are separated by 445 nucleotides mRNA_365: 8733 - K17945 TPM1_2 tropomyosin, fungi type, at 848,017 to 848,980 8733 mRNA_366: 8734 - HMMPfam-Thioredoxin-like-PF13905,SUPERFAMILY--SSF52833, at 849,261 to 850,411 8734 mRNA_367: 8735 - ProSiteProfiles-TPR repeat region circular profile.-PS50293,SMART-Tetratricopeptide repeats-SM00028,SUPERFAMILY--SSF48452, at 850,981 to 853,734 8735 mRNA_368: 8736 - KOG2100 Dipeptidyl aminopeptidase, at 853,834 to 856,786 8736 mRNA_369: 8737 - K20309 TRAPPC12 trafficking protein particle complex subunit 12, at 857,232 to 859,087 8737
Group Condition mRNA_365 mRNA_366 mRNA_367 mRNA_368 mRNA_369
8733 8734 8735 8736 8737
buoyancy on lipid accumulation 40 hrs Median Buoyancy N.D. -1.9 -0.5 +0.2 -0.4
growth on ricinoleic acid YNB Ricinoleic Acid N.D. -1.6 -0.1 -0.1 -0.5
growth on ricinoleic acid YNB Glucose N.D. -1.5 +0.1 -0.0 -0.4
auxotrophy Dropout Complete N.D. -1.0 -0.1 -0.4 -0.2
auxotrophy YNB Glucose 75mM Arginine N.D. -0.9 -0.0 -0.3 -0.4
growth on ricinoleic acid YNB Methylricinoleic Acid N.D. -1.1 -0.1 +0.2 -0.6
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation N.D. -1.0 -0.5 +0.5 -0.5
buoyancy on lipid accumulation 40 hrs High Buoyancy N.D. -1.1 -0.4 +0.1 -0.1
auxotrophy YNB Glucose N.D. -0.9 -0.1 -0.3 -0.2
auxotrophy YNB Glucose 75mM Methionine N.D. -1.0 +0.1 -0.3 -0.2
facs on lipid accumulation Sorted Low BODIPY Gate N.D. -0.5 -0.2 +0.2 -0.4
buoyancy on lipid accumulation 40 hrs Low Buoyancy N.D. -0.3 -0.5 +0.2 -0.2
ypd buoyancy 40 hrs Low Buoyancy N.D. -0.2 +0.3 -0.1 -0.3
ypd buoyancy 40 hrs High Buoyancy N.D. -0.0 +0.4 -0.3 -0.2
facs on lipid accumulation Sorted High BODIPY Gate N.D. +0.2 +0.1 -0.3 -0.1
growth on oleic acid YNB Oleic Acid N.D. -0.1 +0.2 +0.2 -0.3
ypd buoyancy 40 hrs Median Buoyancy N.D. +0.1 +0.3 -0.2 -0.2
growth on oleic acid YNB Glucose N.D. +0.1 -0.1 +0.1 -0.1
growth on ypd YPD N.D. -0.4 +0.2 -0.2 +0.5
facs on lipid accumulation Sorted No BODIPY Gate N.D. +0.3 +0.2 -0.2 -0.1
ypd buoyancy 40 hrs No Buoyancy Separation N.D. +0.4 +0.1 +0.1 -0.2
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