Fitness for 5 genes in Rhodosporidium toruloides IFO0880

Add gene:

Number of genes on each side:  

Top 21 experiments (either direction), sorted by average fitness

Or view all 21 experiments or choose conditions or try the comparative fitness browser

500 nt 8742 and 8743 are separated by 434 nucleotides8743 and 8744 are separated by 474 nucleotides8744 and 8745 are separated by 326 nucleotides8745 and 8746 are separated by 926 nucleotides mRNA_374: 8742 - Hypothetical Protein, at 869,694 to 870,348 8742 mRNA_375: 8743 - HMMPfam-Cytidine and deoxycytidylate deaminase zinc-binding region-PF00383,ProSitePatterns-Cytidine and deoxycytidylate deaminases zinc-binding region signature.-PS00903,SUPERFAMILY--SSF53927, at 870,783 to 871,769 8743 mRNA_376: 8744 - K00381 cysI sulfite reductase (NADPH) hemoprotein beta-component, at 872,244 to 876,604 8744 mRNA_377: 8745 - KOG1515 Arylacetamide deacetylase, at 876,931 to 878,832 8745 mRNA_378: 8746 - K05012 CLCN3_4_5 chloride channel 3/4/5, at 879,759 to 883,039 8746
Group Condition mRNA_374 mRNA_375 mRNA_376 mRNA_377 mRNA_378
8742 8743 8744 8745 8746
buoyancy on lipid accumulation 40 hrs Low Buoyancy +0.7 -0.5 -3.1 -0.1 N.D.
facs on lipid accumulation Sorted Low BODIPY Gate -0.5 +0.2 -2.6 -0.1 N.D.
growth on oleic acid YNB Glucose +0.4 -0.2 -3.0 +0.1 N.D.
growth on ricinoleic acid YNB Glucose -0.1 +0.5 -3.2 +0.1 N.D.
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation -1.0 -0.4 -0.6 -0.0 N.D.
auxotrophy YNB Glucose 75mM Arginine +1.4 -0.1 -3.0 -0.1 N.D.
buoyancy on lipid accumulation 40 hrs Median Buoyancy +0.7 -0.6 -1.9 +0.1 N.D.
facs on lipid accumulation Sorted No BODIPY Gate +0.3 +0.2 -1.8 +0.0 N.D.
auxotrophy YNB Glucose +2.0 +0.1 -3.6 +0.1 N.D.
growth on ricinoleic acid YNB Methylricinoleic Acid +0.1 +0.0 -1.3 +0.0 N.D.
growth on ricinoleic acid YNB Ricinoleic Acid +0.2 -0.1 -1.4 +0.1 N.D.
facs on lipid accumulation Sorted High BODIPY Gate -0.7 +0.2 -0.5 +0.1 N.D.
ypd buoyancy 40 hrs High Buoyancy -0.1 -0.6 +0.4 +0.0 N.D.
growth on oleic acid YNB Oleic Acid -0.1 +0.3 -0.5 +0.0 N.D.
ypd buoyancy 40 hrs Median Buoyancy +0.7 -0.2 -0.2 -0.2 N.D.
growth on ypd YPD -0.4 +1.0 +0.3 +0.1 N.D.
ypd buoyancy 40 hrs Low Buoyancy +1.3 -0.5 +0.5 -0.2 N.D.
ypd buoyancy 40 hrs No Buoyancy Separation +1.8 +0.1 +0.1 -0.3 N.D.
buoyancy on lipid accumulation 40 hrs High Buoyancy +0.8 -0.1 +1.3 -0.3 N.D.
auxotrophy YNB Glucose 75mM Methionine +1.7 -0.1 +0.1 +0.2 N.D.
auxotrophy Dropout Complete +1.9 +0.1 +0.4 -0.3 N.D.
remove
mRNA_374
plot
remove
mRNA_375
plot
remove
mRNA_376
remove
mRNA_377
plot
remove
mRNA_378
plot