Fitness for 5 genes in Rhodosporidium toruloides IFO0880

Add gene:

Number of genes on each side:  

Top 21 experiments (either direction), sorted by average fitness

Or view all 21 experiments or choose conditions or try the comparative fitness browser

500 nt 8745 and 8746 are separated by 926 nucleotides8746 and 8747 are separated by 163 nucleotides8747 and 8748 are separated by 161 nucleotides8748 and 8749 are separated by 170 nucleotides mRNA_377: 8745 - KOG1515 Arylacetamide deacetylase, at 876,931 to 878,832 8745 mRNA_378: 8746 - K05012 CLCN3_4_5 chloride channel 3/4/5, at 879,759 to 883,039 8746 mRNA_379: 8747 - HMMPfam-Inositolphosphorylceramide synthase subunit Kei1-PF08552, at 883,203 to 884,818 8747 mRNA_380: 8748 - K15322 TSEN2 tRNA-splicing endonuclease subunit Sen2, at 884,980 to 886,576 8748 mRNA_381: 8749 - K10415 DYNC1I, DNCI dynein intermediate chain, cytosolic, at 886,747 to 889,332 8749
Group Condition mRNA_377 mRNA_378 mRNA_379 mRNA_380 mRNA_381
8745 8746 8747 8748 8749
ypd buoyancy 40 hrs No Buoyancy Separation -0.3 N.D. -0.3 N.D. N.D.
facs on lipid accumulation Sorted Low BODIPY Gate -0.1 N.D. -0.1 N.D. N.D.
ypd buoyancy 40 hrs Low Buoyancy -0.2 N.D. +0.1 N.D. N.D.
facs on lipid accumulation Sorted No BODIPY Gate +0.0 N.D. -0.0 N.D. N.D.
auxotrophy YNB Glucose 75mM Arginine -0.1 N.D. +0.1 N.D. N.D.
buoyancy on lipid accumulation 40 hrs High Buoyancy -0.3 N.D. +0.3 N.D. N.D.
buoyancy on lipid accumulation 40 hrs Median Buoyancy +0.1 N.D. -0.0 N.D. N.D.
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation -0.0 N.D. +0.1 N.D. N.D.
ypd buoyancy 40 hrs Median Buoyancy -0.2 N.D. +0.3 N.D. N.D.
ypd buoyancy 40 hrs High Buoyancy +0.0 N.D. +0.1 N.D. N.D.
auxotrophy Dropout Complete -0.3 N.D. +0.4 N.D. N.D.
auxotrophy YNB Glucose +0.1 N.D. +0.1 N.D. N.D.
auxotrophy YNB Glucose 75mM Methionine +0.2 N.D. +0.0 N.D. N.D.
buoyancy on lipid accumulation 40 hrs Low Buoyancy -0.1 N.D. +0.4 N.D. N.D.
growth on ricinoleic acid YNB Ricinoleic Acid +0.1 N.D. +0.3 N.D. N.D.
growth on oleic acid YNB Glucose +0.1 N.D. +0.3 N.D. N.D.
growth on oleic acid YNB Oleic Acid +0.0 N.D. +0.3 N.D. N.D.
facs on lipid accumulation Sorted High BODIPY Gate +0.1 N.D. +0.3 N.D. N.D.
growth on ricinoleic acid YNB Methylricinoleic Acid +0.0 N.D. +0.5 N.D. N.D.
growth on ricinoleic acid YNB Glucose +0.1 N.D. +0.4 N.D. N.D.
growth on ypd YPD +0.1 N.D. +0.7 N.D. N.D.
remove
mRNA_377
plot		 remove
mRNA_378
plot		 remove
mRNA_379		 remove
mRNA_380
plot		 remove
mRNA_381
plot