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Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
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Top 21 experiments (either direction), sorted by average fitness
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500 nt
8750 and 8751 are separated by 627 nucleotides
8751 and 8752 are separated by 601 nucleotides
8752 and 8753 are separated by 60 nucleotides
8753 and 8754 are separated by 62 nucleotides
mRNA_382: 8750 - Hypothetical Protein, at 889,583 to 890,268
8750
mRNA_383: 8751 - K02922 RP-L37e, RPL37 large subunit ribosomal protein L37e, at 890,896 to 891,869
8751
mRNA_384: 8752 - KOG0004 Ubiquitin/40S ribosomal protein S27a fusion, at 892,471 to 892,767
8752
mRNA_385: 8753 - Hypothetical Protein, at 892,828 to 898,381
8753
mRNA_386: 8754 - Hypothetical Protein, at 898,444 to 900,294
8754
Group
Condition
mRNA
_382
mRNA
_383
mRNA
_384
mRNA
_385
mRNA
_386
8750
8751
8752
8753
8754
facs on lipid accumulation
Sorted Low BODIPY Gate
-0.6
N.D.
N.D.
-0.3
-0.2
auxotrophy
Dropout Complete
-0.5
N.D.
N.D.
+0.1
-0.3
auxotrophy
YNB Glucose
-0.3
N.D.
N.D.
+0.2
-0.3
facs on lipid accumulation
Sorted High BODIPY Gate
-0.1
N.D.
N.D.
-0.2
-0.2
growth on oleic acid
YNB Oleic Acid
-0.3
N.D.
N.D.
+0.1
-0.2
auxotrophy
YNB Glucose 75mM Arginine
-0.3
N.D.
N.D.
+0.2
-0.1
growth on oleic acid
YNB Glucose
-0.3
N.D.
N.D.
+0.2
-0.1
auxotrophy
YNB Glucose 75mM Methionine
-0.3
N.D.
N.D.
+0.1
+0.0
facs on lipid accumulation
Sorted No BODIPY Gate
+0.3
N.D.
N.D.
-0.2
-0.2
ypd buoyancy
40 hrs High Buoyancy
+0.2
N.D.
N.D.
-0.1
-0.1
ypd buoyancy
40 hrs No Buoyancy Separation
+0.4
N.D.
N.D.
-0.2
-0.0
growth on ricinoleic acid
YNB Methylricinoleic Acid
-0.7
N.D.
N.D.
+0.1
+0.9
ypd buoyancy
40 hrs Low Buoyancy
+0.4
N.D.
N.D.
+0.0
-0.1
ypd buoyancy
40 hrs Median Buoyancy
+0.3
N.D.
N.D.
+0.1
+0.1
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
+0.1
N.D.
N.D.
+0.1
+0.3
growth on ricinoleic acid
YNB Ricinoleic Acid
-0.8
N.D.
N.D.
+0.2
+1.3
buoyancy on lipid accumulation
40 hrs High Buoyancy
-0.0
N.D.
N.D.
-0.3
+1.0
buoyancy on lipid accumulation
40 hrs Median Buoyancy
+0.2
N.D.
N.D.
-0.1
+0.8
buoyancy on lipid accumulation
40 hrs Low Buoyancy
+0.2
N.D.
N.D.
+0.0
+0.8
growth on ypd
YPD
-0.0
N.D.
N.D.
+0.3
+0.9
growth on ricinoleic acid
YNB Glucose
-0.1
N.D.
N.D.
+0.2
+1.1
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