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Protein
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Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
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Top 21 experiments (either direction), sorted by average fitness
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500 nt
8751 and 8752 are separated by 601 nucleotides
8752 and 8753 are separated by 60 nucleotides
8753 and 8754 are separated by 62 nucleotides
8754 and 8755 are separated by 371 nucleotides
mRNA_383: 8751 - K02922 RP-L37e, RPL37 large subunit ribosomal protein L37e, at 890,896 to 891,869
8751
mRNA_384: 8752 - KOG0004 Ubiquitin/40S ribosomal protein S27a fusion, at 892,471 to 892,767
8752
mRNA_385: 8753 - Hypothetical Protein, at 892,828 to 898,381
8753
mRNA_386: 8754 - Hypothetical Protein, at 898,444 to 900,294
8754
mRNA_387: 8755 - Hypothetical Protein, at 900,666 to 901,434
8755
Group
Condition
mRNA
_383
mRNA
_384
mRNA
_385
mRNA
_386
mRNA
_387
8751
8752
8753
8754
8755
ypd buoyancy
40 hrs High Buoyancy
N.D.
N.D.
-0.1
-0.1
-0.2
ypd buoyancy
40 hrs No Buoyancy Separation
N.D.
N.D.
-0.2
-0.0
+0.0
facs on lipid accumulation
Sorted No BODIPY Gate
N.D.
N.D.
-0.2
-0.2
+0.2
ypd buoyancy
40 hrs Low Buoyancy
N.D.
N.D.
+0.0
-0.1
-0.1
facs on lipid accumulation
Sorted High BODIPY Gate
N.D.
N.D.
-0.2
-0.2
+0.3
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
N.D.
N.D.
+0.1
+0.3
-0.4
ypd buoyancy
40 hrs Median Buoyancy
N.D.
N.D.
+0.1
+0.1
-0.1
buoyancy on lipid accumulation
40 hrs Median Buoyancy
N.D.
N.D.
-0.1
+0.8
-0.6
buoyancy on lipid accumulation
40 hrs High Buoyancy
N.D.
N.D.
-0.3
+1.0
-0.5
auxotrophy
YNB Glucose
N.D.
N.D.
+0.2
-0.3
+0.5
auxotrophy
Dropout Complete
N.D.
N.D.
+0.1
-0.3
+0.5
facs on lipid accumulation
Sorted Low BODIPY Gate
N.D.
N.D.
-0.3
-0.2
+0.9
auxotrophy
YNB Glucose 75mM Methionine
N.D.
N.D.
+0.1
+0.0
+0.3
auxotrophy
YNB Glucose 75mM Arginine
N.D.
N.D.
+0.2
-0.1
+0.6
buoyancy on lipid accumulation
40 hrs Low Buoyancy
N.D.
N.D.
+0.0
+0.8
-0.1
growth on oleic acid
YNB Oleic Acid
N.D.
N.D.
+0.1
-0.2
+0.9
growth on oleic acid
YNB Glucose
N.D.
N.D.
+0.2
-0.1
+0.9
growth on ypd
YPD
N.D.
N.D.
+0.3
+0.9
+0.1
growth on ricinoleic acid
YNB Methylricinoleic Acid
N.D.
N.D.
+0.1
+0.9
+0.4
growth on ricinoleic acid
YNB Glucose
N.D.
N.D.
+0.2
+1.1
+0.4
growth on ricinoleic acid
YNB Ricinoleic Acid
N.D.
N.D.
+0.2
+1.3
+0.3
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