Fitness for 5 genes in Rhodosporidium toruloides IFO0880

Add gene:

Number of genes on each side:  

Top 21 experiments (either direction), sorted by average fitness

Or view all 21 experiments or choose conditions or try the comparative fitness browser

500 nt 8754 and 8755 are separated by 371 nucleotides8755 and 8756 are separated by 2098 nucleotides8756 and 8757 are separated by 2837 nucleotides8757 and 8758 are separated by 265 nucleotides mRNA_386: 8754 - Hypothetical Protein, at 898,444 to 900,294 8754 mRNA_387: 8755 - Hypothetical Protein, at 900,666 to 901,434 8755 mRNA_388: 8756 - Hypothetical Protein, at 903,533 to 904,021 8756 mRNA_389: 8757 - HMMPfam-Vacuolar sorting protein 9 (VPS9) domain-PF02204,ProSiteProfiles-VPS9 domain profile.-PS51205,SUPERFAMILY--SSF109993, at 906,859 to 910,715 8757 mRNA_390: 8758 - K00869 E2.7.1.36, MVK, mvaK1 mevalonate kinase, at 910,981 to 912,334 8758
Group Condition mRNA_386 mRNA_387 mRNA_388 mRNA_389 mRNA_390
8754 8755 8756 8757 8758
ypd buoyancy 40 hrs No Buoyancy Separation -0.0 +0.0 -1.5 -0.5 N.D.
auxotrophy Dropout Complete -0.3 +0.5 -0.3 -0.6 N.D.
ypd buoyancy 40 hrs High Buoyancy -0.1 -0.2 +0.1 -0.3 N.D.
auxotrophy YNB Glucose -0.3 +0.5 -0.1 -0.5 N.D.
ypd buoyancy 40 hrs Low Buoyancy -0.1 -0.1 -0.3 -0.0 N.D.
ypd buoyancy 40 hrs Median Buoyancy +0.1 -0.1 -0.3 -0.1 N.D.
auxotrophy YNB Glucose 75mM Arginine -0.1 +0.6 -0.4 -0.4 N.D.
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation +0.3 -0.4 -0.2 +0.1 N.D.
auxotrophy YNB Glucose 75mM Methionine +0.0 +0.3 -0.4 -0.0 N.D.
facs on lipid accumulation Sorted No BODIPY Gate -0.2 +0.2 -0.1 +0.1 N.D.
facs on lipid accumulation Sorted Low BODIPY Gate -0.2 +0.9 -0.4 -0.0 N.D.
facs on lipid accumulation Sorted High BODIPY Gate -0.2 +0.3 +0.1 +0.2 N.D.
buoyancy on lipid accumulation 40 hrs Low Buoyancy +0.8 -0.1 -0.1 +0.0 N.D.
buoyancy on lipid accumulation 40 hrs Median Buoyancy +0.8 -0.6 +0.0 +0.5 N.D.
growth on ypd YPD +0.9 +0.1 -0.1 -0.1 N.D.
growth on oleic acid YNB Oleic Acid -0.2 +0.9 -0.1 +0.1 N.D.
buoyancy on lipid accumulation 40 hrs High Buoyancy +1.0 -0.5 -0.3 +0.6 N.D.
growth on oleic acid YNB Glucose -0.1 +0.9 -0.1 +0.1 N.D.
growth on ricinoleic acid YNB Methylricinoleic Acid +0.9 +0.4 -0.3 +0.2 N.D.
growth on ricinoleic acid YNB Glucose +1.1 +0.4 -0.2 +0.1 N.D.
growth on ricinoleic acid YNB Ricinoleic Acid +1.3 +0.3 -0.1 +0.5 N.D.
remove
mRNA_386
plot
remove
mRNA_387
plot
remove
mRNA_388
remove
mRNA_389
plot
remove
mRNA_390
plot