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Protein
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Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
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Top 21 experiments (either direction), sorted by average fitness
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500 nt
8759 and 8760 are separated by 713 nucleotides
8760 and 8761 are separated by 190 nucleotides
8761 and 8762 are separated by 179 nucleotides
8762 and 8763 are separated by 520 nucleotides
mRNA_391: 8759 - K01760 metC cystathionine beta-lyase, at 912,636 to 914,194
8759
mRNA_392: 8760 - K12834 PHF5A PHD finger-like domain-containing protein 5A, at 914,908 to 915,580
8760
mRNA_393: 8761 - Hypothetical Protein, at 915,771 to 916,536
8761
mRNA_394: 8762 - KOG0714 Molecular chaperone (DnaJ superfamily), at 916,716 to 918,157
8762
mRNA_395: 8763 - KOG2262 Sexual differentiation process protein ISP4, at 918,678 to 921,418
8763
Group
Condition
mRNA
_391
mRNA
_392
mRNA
_393
mRNA
_394
mRNA
_395
8759
8760
8761
8762
8763
growth on ricinoleic acid
YNB Ricinoleic Acid
N.D.
N.D.
-0.6
-0.4
-0.0
growth on ricinoleic acid
YNB Glucose
N.D.
N.D.
-0.4
-0.3
-0.3
growth on ricinoleic acid
YNB Methylricinoleic Acid
N.D.
N.D.
-0.1
-0.4
-0.3
facs on lipid accumulation
Sorted Low BODIPY Gate
N.D.
N.D.
+0.0
-0.0
-0.9
facs on lipid accumulation
Sorted High BODIPY Gate
N.D.
N.D.
-0.3
+0.0
-0.5
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
N.D.
N.D.
-0.9
+0.3
-0.2
ypd buoyancy
40 hrs No Buoyancy Separation
N.D.
N.D.
-0.1
+0.3
-0.6
auxotrophy
YNB Glucose 75mM Methionine
N.D.
N.D.
+0.0
-0.1
+0.0
auxotrophy
YNB Glucose 75mM Arginine
N.D.
N.D.
-0.1
-0.2
+0.3
growth on ypd
YPD
N.D.
N.D.
+0.1
+0.2
-0.2
auxotrophy
Dropout Complete
N.D.
N.D.
+0.2
-0.2
+0.2
facs on lipid accumulation
Sorted No BODIPY Gate
N.D.
N.D.
+0.0
+0.3
+0.0
auxotrophy
YNB Glucose
N.D.
N.D.
+0.1
-0.1
+0.3
ypd buoyancy
40 hrs Low Buoyancy
N.D.
N.D.
+0.7
-0.1
-0.3
buoyancy on lipid accumulation
40 hrs High Buoyancy
N.D.
N.D.
+0.2
+0.3
-0.1
buoyancy on lipid accumulation
40 hrs Median Buoyancy
N.D.
N.D.
+0.2
+0.2
-0.0
buoyancy on lipid accumulation
40 hrs Low Buoyancy
N.D.
N.D.
+0.1
+0.3
-0.0
ypd buoyancy
40 hrs High Buoyancy
N.D.
N.D.
+0.4
+0.2
+0.0
growth on oleic acid
YNB Glucose
N.D.
N.D.
+0.4
+0.3
+0.2
ypd buoyancy
40 hrs Median Buoyancy
N.D.
N.D.
+0.8
+0.2
+0.1
growth on oleic acid
YNB Oleic Acid
N.D.
N.D.
+0.5
+0.3
+0.5
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