Fitness for 5 genes in Rhodosporidium toruloides IFO0880

Add gene:

Number of genes on each side:  

Top 21 experiments (either direction), sorted by average fitness

Or view all 21 experiments or choose conditions or try the comparative fitness browser

500 nt 8759 and 8760 are separated by 713 nucleotides8760 and 8761 are separated by 190 nucleotides8761 and 8762 are separated by 179 nucleotides8762 and 8763 are separated by 520 nucleotides mRNA_391: 8759 - K01760 metC cystathionine beta-lyase, at 912,636 to 914,194 8759 mRNA_392: 8760 - K12834 PHF5A PHD finger-like domain-containing protein 5A, at 914,908 to 915,580 8760 mRNA_393: 8761 - Hypothetical Protein, at 915,771 to 916,536 8761 mRNA_394: 8762 - KOG0714 Molecular chaperone (DnaJ superfamily), at 916,716 to 918,157 8762 mRNA_395: 8763 - KOG2262 Sexual differentiation process protein ISP4, at 918,678 to 921,418 8763
Group Condition mRNA_391 mRNA_392 mRNA_393 mRNA_394 mRNA_395
8759 8760 8761 8762 8763
growth on ricinoleic acid YNB Ricinoleic Acid N.D. N.D. -0.6 -0.4 -0.0
growth on ricinoleic acid YNB Glucose N.D. N.D. -0.4 -0.3 -0.3
growth on ricinoleic acid YNB Methylricinoleic Acid N.D. N.D. -0.1 -0.4 -0.3
facs on lipid accumulation Sorted Low BODIPY Gate N.D. N.D. +0.0 -0.0 -0.9
facs on lipid accumulation Sorted High BODIPY Gate N.D. N.D. -0.3 +0.0 -0.5
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation N.D. N.D. -0.9 +0.3 -0.2
ypd buoyancy 40 hrs No Buoyancy Separation N.D. N.D. -0.1 +0.3 -0.6
auxotrophy YNB Glucose 75mM Methionine N.D. N.D. +0.0 -0.1 +0.0
auxotrophy YNB Glucose 75mM Arginine N.D. N.D. -0.1 -0.2 +0.3
growth on ypd YPD N.D. N.D. +0.1 +0.2 -0.2
auxotrophy Dropout Complete N.D. N.D. +0.2 -0.2 +0.2
facs on lipid accumulation Sorted No BODIPY Gate N.D. N.D. +0.0 +0.3 +0.0
auxotrophy YNB Glucose N.D. N.D. +0.1 -0.1 +0.3
ypd buoyancy 40 hrs Low Buoyancy N.D. N.D. +0.7 -0.1 -0.3
buoyancy on lipid accumulation 40 hrs High Buoyancy N.D. N.D. +0.2 +0.3 -0.1
buoyancy on lipid accumulation 40 hrs Median Buoyancy N.D. N.D. +0.2 +0.2 -0.0
buoyancy on lipid accumulation 40 hrs Low Buoyancy N.D. N.D. +0.1 +0.3 -0.0
ypd buoyancy 40 hrs High Buoyancy N.D. N.D. +0.4 +0.2 +0.0
growth on oleic acid YNB Glucose N.D. N.D. +0.4 +0.3 +0.2
ypd buoyancy 40 hrs Median Buoyancy N.D. N.D. +0.8 +0.2 +0.1
growth on oleic acid YNB Oleic Acid N.D. N.D. +0.5 +0.3 +0.5
remove
mRNA_391
plot
remove
mRNA_392
plot
remove
mRNA_393
remove
mRNA_394
plot
remove
mRNA_395
plot