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Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
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Top 21 experiments (either direction), sorted by average fitness
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500 nt
8760 and 8761 are separated by 190 nucleotides
8761 and 8762 are separated by 179 nucleotides
8762 and 8763 are separated by 520 nucleotides
8763 and 8764 are separated by 272 nucleotides
mRNA_392: 8760 - K12834 PHF5A PHD finger-like domain-containing protein 5A, at 914,908 to 915,580
8760
mRNA_393: 8761 - Hypothetical Protein, at 915,771 to 916,536
8761
mRNA_394: 8762 - KOG0714 Molecular chaperone (DnaJ superfamily), at 916,716 to 918,157
8762
mRNA_395: 8763 - KOG2262 Sexual differentiation process protein ISP4, at 918,678 to 921,418
8763
mRNA_396: 8764 - K07478 ycaJ putative ATPase, at 921,691 to 924,142
8764
Group
Condition
mRNA
_392
mRNA
_393
mRNA
_394
mRNA
_395
mRNA
_396
8760
8761
8762
8763
8764
facs on lipid accumulation
Sorted High BODIPY Gate
N.D.
-0.3
+0.0
-0.5
-1.0
growth on ricinoleic acid
YNB Ricinoleic Acid
N.D.
-0.6
-0.4
-0.0
-0.1
growth on ricinoleic acid
YNB Methylricinoleic Acid
N.D.
-0.1
-0.4
-0.3
-0.2
growth on ricinoleic acid
YNB Glucose
N.D.
-0.4
-0.3
-0.3
+0.0
facs on lipid accumulation
Sorted Low BODIPY Gate
N.D.
+0.0
-0.0
-0.9
+0.2
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
N.D.
-0.9
+0.3
-0.2
+0.3
ypd buoyancy
40 hrs No Buoyancy Separation
N.D.
-0.1
+0.3
-0.6
-0.0
auxotrophy
YNB Glucose 75mM Methionine
N.D.
+0.0
-0.1
+0.0
-0.1
auxotrophy
Dropout Complete
N.D.
+0.2
-0.2
+0.2
-0.1
ypd buoyancy
40 hrs Low Buoyancy
N.D.
+0.7
-0.1
-0.3
-0.2
auxotrophy
YNB Glucose
N.D.
+0.1
-0.1
+0.3
-0.1
auxotrophy
YNB Glucose 75mM Arginine
N.D.
-0.1
-0.2
+0.3
+0.1
facs on lipid accumulation
Sorted No BODIPY Gate
N.D.
+0.0
+0.3
+0.0
-0.0
ypd buoyancy
40 hrs High Buoyancy
N.D.
+0.4
+0.2
+0.0
-0.2
growth on ypd
YPD
N.D.
+0.1
+0.2
-0.2
+0.4
buoyancy on lipid accumulation
40 hrs Low Buoyancy
N.D.
+0.1
+0.3
-0.0
+0.1
buoyancy on lipid accumulation
40 hrs High Buoyancy
N.D.
+0.2
+0.3
-0.1
+0.3
buoyancy on lipid accumulation
40 hrs Median Buoyancy
N.D.
+0.2
+0.2
-0.0
+0.5
ypd buoyancy
40 hrs Median Buoyancy
N.D.
+0.8
+0.2
+0.1
-0.0
growth on oleic acid
YNB Glucose
N.D.
+0.4
+0.3
+0.2
+0.2
growth on oleic acid
YNB Oleic Acid
N.D.
+0.5
+0.3
+0.5
+0.0
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