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Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
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Top 21 experiments (either direction), sorted by average fitness
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500 nt
8763 and 8764 are separated by 272 nucleotides
8764 and 8765 are separated by 169 nucleotides
8765 and 8766 are separated by 269 nucleotides
8766 and 8767 are separated by 172 nucleotides
mRNA_395: 8763 - KOG2262 Sexual differentiation process protein ISP4, at 918,678 to 921,418
8763
mRNA_396: 8764 - K07478 ycaJ putative ATPase, at 921,691 to 924,142
8764
mRNA_397: 8765 - SUPERFAMILY--SSF52047, at 924,312 to 925,720
8765
mRNA_398: 8766 - KOG1305 Amino acid transporter protein, at 925,990 to 928,121
8766
mRNA_399: 8767 - K06874 K06874 zinc finger protein, at 928,294 to 930,157
8767
Group
Condition
mRNA
_395
mRNA
_396
mRNA
_397
mRNA
_398
mRNA
_399
8763
8764
8765
8766
8767
facs on lipid accumulation
Sorted High BODIPY Gate
-0.5
-1.0
-0.3
+0.4
N.D.
ypd buoyancy
40 hrs No Buoyancy Separation
-0.6
-0.0
-0.1
-0.4
N.D.
growth on ricinoleic acid
YNB Methylricinoleic Acid
-0.3
-0.2
-0.1
+0.2
N.D.
ypd buoyancy
40 hrs Low Buoyancy
-0.3
-0.2
+0.2
+0.1
N.D.
buoyancy on lipid accumulation
40 hrs High Buoyancy
-0.1
+0.3
-0.3
+0.1
N.D.
growth on ricinoleic acid
YNB Glucose
-0.3
+0.0
-0.1
+0.4
N.D.
auxotrophy
Dropout Complete
+0.2
-0.1
+0.3
-0.3
N.D.
facs on lipid accumulation
Sorted Low BODIPY Gate
-0.9
+0.2
+0.8
+0.1
N.D.
auxotrophy
YNB Glucose
+0.3
-0.1
+0.1
-0.1
N.D.
growth on ricinoleic acid
YNB Ricinoleic Acid
-0.0
-0.1
-0.1
+0.5
N.D.
ypd buoyancy
40 hrs High Buoyancy
+0.0
-0.2
+0.2
+0.2
N.D.
auxotrophy
YNB Glucose 75mM Methionine
+0.0
-0.1
+0.6
-0.2
N.D.
growth on ypd
YPD
-0.2
+0.4
-0.1
+0.3
N.D.
ypd buoyancy
40 hrs Median Buoyancy
+0.1
-0.0
+0.3
-0.0
N.D.
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
-0.2
+0.3
-0.2
+0.4
N.D.
facs on lipid accumulation
Sorted No BODIPY Gate
+0.0
-0.0
+0.2
+0.2
N.D.
buoyancy on lipid accumulation
40 hrs Low Buoyancy
-0.0
+0.1
-0.1
+0.4
N.D.
growth on oleic acid
YNB Glucose
+0.2
+0.2
+0.2
+0.1
N.D.
buoyancy on lipid accumulation
40 hrs Median Buoyancy
-0.0
+0.5
+0.0
+0.2
N.D.
growth on oleic acid
YNB Oleic Acid
+0.5
+0.0
+0.4
+0.2
N.D.
auxotrophy
YNB Glucose 75mM Arginine
+0.3
+0.1
+0.8
-0.1
N.D.
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