Fitness for 5 genes in Rhodosporidium toruloides IFO0880

Add gene:

Number of genes on each side:  

Top 21 experiments (either direction), sorted by average fitness

Or view all 21 experiments or choose conditions or try the comparative fitness browser

500 nt 8764 and 8765 are separated by 169 nucleotides8765 and 8766 are separated by 269 nucleotides8766 and 8767 are separated by 172 nucleotides8767 and 8768 are separated by 338 nucleotides mRNA_396: 8764 - K07478 ycaJ putative ATPase, at 921,691 to 924,142 8764 mRNA_397: 8765 - SUPERFAMILY--SSF52047, at 924,312 to 925,720 8765 mRNA_398: 8766 - KOG1305 Amino acid transporter protein, at 925,990 to 928,121 8766 mRNA_399: 8767 - K06874 K06874 zinc finger protein, at 928,294 to 930,157 8767 mRNA_400: 8768 - K00728 POMT dolichyl-phosphate-mannose-protein mannosyltransferase, at 930,496 to 933,710 8768
Group Condition mRNA_396 mRNA_397 mRNA_398 mRNA_399 mRNA_400
8764 8765 8766 8767 8768
ypd buoyancy 40 hrs No Buoyancy Separation -0.0 -0.1 -0.4 N.D. -1.0
growth on ricinoleic acid YNB Ricinoleic Acid -0.1 -0.1 +0.5 N.D. -1.0
facs on lipid accumulation Sorted High BODIPY Gate -1.0 -0.3 +0.4 N.D. +0.1
growth on ricinoleic acid YNB Methylricinoleic Acid -0.2 -0.1 +0.2 N.D. -0.7
buoyancy on lipid accumulation 40 hrs High Buoyancy +0.3 -0.3 +0.1 N.D. -0.1
auxotrophy YNB Glucose -0.1 +0.1 -0.1 N.D. +0.2
ypd buoyancy 40 hrs Median Buoyancy -0.0 +0.3 -0.0 N.D. -0.0
facs on lipid accumulation Sorted No BODIPY Gate -0.0 +0.2 +0.2 N.D. -0.1
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation +0.3 -0.2 +0.4 N.D. -0.2
buoyancy on lipid accumulation 40 hrs Low Buoyancy +0.1 -0.1 +0.4 N.D. -0.1
growth on ricinoleic acid YNB Glucose +0.0 -0.1 +0.4 N.D. +0.2
ypd buoyancy 40 hrs High Buoyancy -0.2 +0.2 +0.2 N.D. +0.3
auxotrophy YNB Glucose 75mM Methionine -0.1 +0.6 -0.2 N.D. +0.3
auxotrophy Dropout Complete -0.1 +0.3 -0.3 N.D. +0.8
buoyancy on lipid accumulation 40 hrs Median Buoyancy +0.5 +0.0 +0.2 N.D. -0.1
ypd buoyancy 40 hrs Low Buoyancy -0.2 +0.2 +0.1 N.D. +0.5
facs on lipid accumulation Sorted Low BODIPY Gate +0.2 +0.8 +0.1 N.D. -0.2
growth on ypd YPD +0.4 -0.1 +0.3 N.D. +0.4
growth on oleic acid YNB Glucose +0.2 +0.2 +0.1 N.D. +0.8
auxotrophy YNB Glucose 75mM Arginine +0.1 +0.8 -0.1 N.D. +0.4
growth on oleic acid YNB Oleic Acid +0.0 +0.4 +0.2 N.D. +1.0
remove
mRNA_396
plot
remove
mRNA_397
plot
remove
mRNA_398
remove
mRNA_399
plot
remove
mRNA_400
plot