Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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500 nt 8768 and 8769 are separated by 606 nucleotides8769 and 8770 are separated by 42 nucleotides8770 and 8771 are separated by 73 nucleotides8771 and 8772 are separated by 430 nucleotides mRNA_400: 8768 - K00728 POMT dolichyl-phosphate-mannose-protein mannosyltransferase, at 930,496 to 933,710 8768 mRNA_401: 8769 - BLAST putative protein [Melanopsichium pennsylvanicum 4], at 934,317 to 936,010 8769 mRNA_402: 8770 - BLAST N-terminal acetyltransferase catalytic subunit Nat1 [..., at 936,053 to 937,253 8770 mRNA_403: 8771 - Hypothetical Protein, at 937,327 to 938,664 8771 mRNA_404: 8772 - HMMPfam-PB1 domain-PF00564,HMMPfam-Zinc finger, ZZ type-PF00569,ProSitePatterns-Zinc finger ZZ-type signature.-PS01357,ProSiteProfiles-Zinc finger ZZ-type profile.-PS50135,SMART-Zinc-binding domain, present in Dystrophin, CREB-binding protein.-SM00291,SUPERFAMILY--SSF54277,SUPERFAMILY--SSF57850, at 939,095 to 942,093 8772
Group Condition mRNA_400 mRNA_401 mRNA_402 mRNA_403 mRNA_404
8768 8769 8770 8771 8772
facs on lipid accumulation Sorted High BODIPY Gate +0.1 -1.3 -1.0 -1.5 -0.1
ypd buoyancy 40 hrs No Buoyancy Separation -1.0 -0.7 -0.1 -0.0 +0.0
buoyancy on lipid accumulation 40 hrs High Buoyancy -0.1 -0.0 -0.2 -0.2 -0.2
growth on ricinoleic acid YNB Methylricinoleic Acid -0.7 +0.2 +0.0 -0.2 -0.1
growth on ricinoleic acid YNB Ricinoleic Acid -1.0 +0.2 +0.2 -0.0 +0.1
buoyancy on lipid accumulation 40 hrs Median Buoyancy -0.1 -0.3 +0.0 +0.1 -0.3
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation -0.2 +0.1 +0.1 +0.0 -0.4
growth on ypd YPD +0.4 -0.4 -0.1 +0.0 -0.1
facs on lipid accumulation Sorted No BODIPY Gate -0.1 -0.2 -0.1 +0.1 +0.2
growth on ricinoleic acid YNB Glucose +0.2 +0.1 -0.0 -0.1 +0.0
ypd buoyancy 40 hrs Median Buoyancy -0.0 +0.0 +0.1 +0.1 +0.1
ypd buoyancy 40 hrs High Buoyancy +0.3 -0.1 +0.1 +0.2 -0.1
growth on oleic acid YNB Glucose +0.8 +0.1 -0.0 -0.0 -0.4
ypd buoyancy 40 hrs Low Buoyancy +0.5 +0.1 +0.0 -0.0 -0.1
auxotrophy YNB Glucose 75mM Methionine +0.3 +0.6 -0.0 -0.1 -0.1
growth on oleic acid YNB Oleic Acid +1.0 -0.0 -0.0 -0.0 -0.2
auxotrophy YNB Glucose +0.2 +0.6 +0.1 +0.1 -0.1
auxotrophy YNB Glucose 75mM Arginine +0.4 +0.6 +0.0 +0.1 -0.1
auxotrophy Dropout Complete +0.8 +0.4 -0.0 -0.1 -0.1
buoyancy on lipid accumulation 40 hrs Low Buoyancy -0.1 +0.5 +0.3 +0.4 +0.2
facs on lipid accumulation Sorted Low BODIPY Gate -0.2 +0.3 +0.9 +1.0 +0.5
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