Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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Top 21 experiments (either direction), sorted by average fitness

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500 nt 8770 and 8771 are separated by 73 nucleotides8771 and 8772 are separated by 430 nucleotides8772 and 8773 are separated by 433 nucleotides8773 and 8774 are separated by 299 nucleotides mRNA_402: 8770 - BLAST N-terminal acetyltransferase catalytic subunit Nat1 [..., at 936,053 to 937,253 8770 mRNA_403: 8771 - Hypothetical Protein, at 937,327 to 938,664 8771 mRNA_404: 8772 - HMMPfam-PB1 domain-PF00564,HMMPfam-Zinc finger, ZZ type-PF00569,ProSitePatterns-Zinc finger ZZ-type signature.-PS01357,ProSiteProfiles-Zinc finger ZZ-type profile.-PS50135,SMART-Zinc-binding domain, present in Dystrophin, CREB-binding protein.-SM00291,SUPERFAMILY--SSF54277,SUPERFAMILY--SSF57850, at 939,095 to 942,093 8772 mRNA_405: 8773 - KOG4563 Cell cycle-regulated histone H1-binding protein, at 942,527 to 943,923 8773 mRNA_406: 8774 - HMMPfam-NmrA-like family-PF05368,SUPERFAMILY--SSF51735, at 944,223 to 945,484 8774
Group Condition mRNA_402 mRNA_403 mRNA_404 mRNA_405 mRNA_406
8770 8771 8772 8773 8774
facs on lipid accumulation Sorted High BODIPY Gate -1.0 -1.5 -0.1 N.D. -0.9
ypd buoyancy 40 hrs Low Buoyancy +0.0 -0.0 -0.1 N.D. -1.8
ypd buoyancy 40 hrs No Buoyancy Separation -0.1 -0.0 +0.0 N.D. -1.7
auxotrophy YNB Glucose 75mM Methionine -0.0 -0.1 -0.1 N.D. -1.1
growth on ypd YPD -0.1 +0.0 -0.1 N.D. -0.6
growth on ricinoleic acid YNB Methylricinoleic Acid +0.0 -0.2 -0.1 N.D. -0.5
buoyancy on lipid accumulation 40 hrs High Buoyancy -0.2 -0.2 -0.2 N.D. +0.0
auxotrophy YNB Glucose +0.1 +0.1 -0.1 N.D. -0.6
auxotrophy YNB Glucose 75mM Arginine +0.0 +0.1 -0.1 N.D. -0.3
ypd buoyancy 40 hrs High Buoyancy +0.1 +0.2 -0.1 N.D. -0.4
buoyancy on lipid accumulation 40 hrs Median Buoyancy +0.0 +0.1 -0.3 N.D. +0.0
ypd buoyancy 40 hrs Median Buoyancy +0.1 +0.1 +0.1 N.D. -0.3
auxotrophy Dropout Complete -0.0 -0.1 -0.1 N.D. +0.2
facs on lipid accumulation Sorted No BODIPY Gate -0.1 +0.1 +0.2 N.D. +0.0
growth on oleic acid YNB Glucose -0.0 -0.0 -0.4 N.D. +0.8
growth on ricinoleic acid YNB Glucose -0.0 -0.1 +0.0 N.D. +0.5
growth on ricinoleic acid YNB Ricinoleic Acid +0.2 -0.0 +0.1 N.D. +0.3
buoyancy on lipid accumulation 40 hrs Low Buoyancy +0.3 +0.4 +0.2 N.D. -0.2
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation +0.1 +0.0 -0.4 N.D. +1.0
growth on oleic acid YNB Oleic Acid -0.0 -0.0 -0.2 N.D. +1.9
facs on lipid accumulation Sorted Low BODIPY Gate +0.9 +1.0 +0.5 N.D. -0.4
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