Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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500 nt 8772 and 8773 are separated by 433 nucleotides8773 and 8774 are separated by 299 nucleotides8774 and 8775 are separated by 98 nucleotides8775 and 8776 are separated by 1214 nucleotides mRNA_404: 8772 - HMMPfam-PB1 domain-PF00564,HMMPfam-Zinc finger, ZZ type-PF00569,ProSitePatterns-Zinc finger ZZ-type signature.-PS01357,ProSiteProfiles-Zinc finger ZZ-type profile.-PS50135,SMART-Zinc-binding domain, present in Dystrophin, CREB-binding protein.-SM00291,SUPERFAMILY--SSF54277,SUPERFAMILY--SSF57850, at 939,095 to 942,093 8772 mRNA_405: 8773 - KOG4563 Cell cycle-regulated histone H1-binding protein, at 942,527 to 943,923 8773 mRNA_406: 8774 - HMMPfam-NmrA-like family-PF05368,SUPERFAMILY--SSF51735, at 944,223 to 945,484 8774 mRNA_407: 8775 - Hypothetical Protein, at 945,583 to 946,571 8775 mRNA_408: 8776 - Hypothetical Protein, at 947,786 to 948,268 8776
Group Condition mRNA_404 mRNA_405 mRNA_406 mRNA_407 mRNA_408
8772 8773 8774 8775 8776
ypd buoyancy 40 hrs Low Buoyancy -0.1 N.D. -1.8 -0.3 N.D.
ypd buoyancy 40 hrs No Buoyancy Separation +0.0 N.D. -1.7 -0.3 N.D.
ypd buoyancy 40 hrs Median Buoyancy +0.1 N.D. -0.3 -1.0 N.D.
facs on lipid accumulation Sorted High BODIPY Gate -0.1 N.D. -0.9 -0.2 N.D.
auxotrophy YNB Glucose 75mM Methionine -0.1 N.D. -1.1 +0.0 N.D.
growth on ypd YPD -0.1 N.D. -0.6 -0.3 N.D.
ypd buoyancy 40 hrs High Buoyancy -0.1 N.D. -0.4 -0.2 N.D.
growth on ricinoleic acid YNB Methylricinoleic Acid -0.1 N.D. -0.5 +0.1 N.D.
growth on ricinoleic acid YNB Ricinoleic Acid +0.1 N.D. +0.3 -0.7 N.D.
auxotrophy YNB Glucose 75mM Arginine -0.1 N.D. -0.3 +0.1 N.D.
facs on lipid accumulation Sorted No BODIPY Gate +0.2 N.D. +0.0 -0.5 N.D.
auxotrophy YNB Glucose -0.1 N.D. -0.6 +0.6 N.D.
growth on oleic acid YNB Glucose -0.4 N.D. +0.8 -0.4 N.D.
auxotrophy Dropout Complete -0.1 N.D. +0.2 +0.0 N.D.
buoyancy on lipid accumulation 40 hrs Low Buoyancy +0.2 N.D. -0.2 +0.4 N.D.
buoyancy on lipid accumulation 40 hrs Median Buoyancy -0.3 N.D. +0.0 +0.7 N.D.
facs on lipid accumulation Sorted Low BODIPY Gate +0.5 N.D. -0.4 +0.4 N.D.
buoyancy on lipid accumulation 40 hrs High Buoyancy -0.2 N.D. +0.0 +1.1 N.D.
growth on ricinoleic acid YNB Glucose +0.0 N.D. +0.5 +0.5 N.D.
growth on oleic acid YNB Oleic Acid -0.2 N.D. +1.9 -0.5 N.D.
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation -0.4 N.D. +1.0 +0.7 N.D.
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