Fitness for 5 genes in Rhodosporidium toruloides IFO0880

Add gene:

Number of genes on each side:  

Top 21 experiments (either direction), sorted by average fitness

Or view all 21 experiments or choose conditions or try the comparative fitness browser

500 nt 8774 and 8775 are separated by 98 nucleotides8775 and 8776 are separated by 1214 nucleotides8776 and 8777 are separated by 2429 nucleotides8777 and 8778 are separated by 611 nucleotides mRNA_406: 8774 - HMMPfam-NmrA-like family-PF05368,SUPERFAMILY--SSF51735, at 944,223 to 945,484 8774 mRNA_407: 8775 - Hypothetical Protein, at 945,583 to 946,571 8775 mRNA_408: 8776 - Hypothetical Protein, at 947,786 to 948,268 8776 mRNA_409: 8777 - K00667 FAS2 fatty acid synthase subunit alpha, fungi type, at 950,698 to 960,325 8777 mRNA_410: 8778 - HMMPfam-WD domain, G-beta repeat-PF00400, at 960,937 to 962,253 8778
Group Condition mRNA_406 mRNA_407 mRNA_408 mRNA_409 mRNA_410
8774 8775 8776 8777 8778
ypd buoyancy 40 hrs Low Buoyancy -1.8 -0.3 N.D. N.D. -0.3
auxotrophy YNB Glucose 75mM Methionine -1.1 +0.0 N.D. N.D. -1.0
auxotrophy YNB Glucose 75mM Arginine -0.3 +0.1 N.D. N.D. -1.7
facs on lipid accumulation Sorted High BODIPY Gate -0.9 -0.2 N.D. N.D. -0.8
ypd buoyancy 40 hrs Median Buoyancy -0.3 -1.0 N.D. N.D. -0.2
ypd buoyancy 40 hrs No Buoyancy Separation -1.7 -0.3 N.D. N.D. +0.5
auxotrophy YNB Glucose -0.6 +0.6 N.D. N.D. -1.3
growth on ricinoleic acid YNB Methylricinoleic Acid -0.5 +0.1 N.D. N.D. -0.5
ypd buoyancy 40 hrs High Buoyancy -0.4 -0.2 N.D. N.D. -0.3
growth on ypd YPD -0.6 -0.3 N.D. N.D. +0.0
facs on lipid accumulation Sorted No BODIPY Gate +0.0 -0.5 N.D. N.D. +0.2
auxotrophy Dropout Complete +0.2 +0.0 N.D. N.D. -0.5
buoyancy on lipid accumulation 40 hrs Low Buoyancy -0.2 +0.4 N.D. N.D. -0.5
growth on ricinoleic acid YNB Ricinoleic Acid +0.3 -0.7 N.D. N.D. +0.2
growth on oleic acid YNB Glucose +0.8 -0.4 N.D. N.D. -0.5
facs on lipid accumulation Sorted Low BODIPY Gate -0.4 +0.4 N.D. N.D. +0.5
buoyancy on lipid accumulation 40 hrs High Buoyancy +0.0 +1.1 N.D. N.D. -0.6
buoyancy on lipid accumulation 40 hrs Median Buoyancy +0.0 +0.7 N.D. N.D. -0.1
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation +1.0 +0.7 N.D. N.D. -0.7
growth on oleic acid YNB Oleic Acid +1.9 -0.5 N.D. N.D. -0.0
growth on ricinoleic acid YNB Glucose +0.5 +0.5 N.D. N.D. +0.4
remove
mRNA_406
plot
remove
mRNA_407
plot
remove
mRNA_408
remove
mRNA_409
plot
remove
mRNA_410
plot