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Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
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Top 21 experiments (either direction), sorted by average fitness
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500 nt
8775 and 8776 are separated by 1214 nucleotides
8776 and 8777 are separated by 2429 nucleotides
8777 and 8778 are separated by 611 nucleotides
8778 and 8779 are separated by 610 nucleotides
mRNA_407: 8775 - Hypothetical Protein, at 945,583 to 946,571
8775
mRNA_408: 8776 - Hypothetical Protein, at 947,786 to 948,268
8776
mRNA_409: 8777 - K00667 FAS2 fatty acid synthase subunit alpha, fungi type, at 950,698 to 960,325
8777
mRNA_410: 8778 - HMMPfam-WD domain, G-beta repeat-PF00400, at 960,937 to 962,253
8778
mRNA_411: 8779 - K12862 PLRG1, PRL1, PRP46 pleiotropic regulator 1, at 962,864 to 964,890
8779
Group
Condition
mRNA
_407
mRNA
_408
mRNA
_409
mRNA
_410
mRNA
_411
8775
8776
8777
8778
8779
auxotrophy
YNB Glucose 75mM Arginine
+0.1
N.D.
N.D.
-1.7
N.D.
ypd buoyancy
40 hrs Median Buoyancy
-1.0
N.D.
N.D.
-0.2
N.D.
facs on lipid accumulation
Sorted High BODIPY Gate
-0.2
N.D.
N.D.
-0.8
N.D.
auxotrophy
YNB Glucose 75mM Methionine
+0.0
N.D.
N.D.
-1.0
N.D.
growth on oleic acid
YNB Glucose
-0.4
N.D.
N.D.
-0.5
N.D.
auxotrophy
YNB Glucose
+0.6
N.D.
N.D.
-1.3
N.D.
ypd buoyancy
40 hrs Low Buoyancy
-0.3
N.D.
N.D.
-0.3
N.D.
ypd buoyancy
40 hrs High Buoyancy
-0.2
N.D.
N.D.
-0.3
N.D.
growth on oleic acid
YNB Oleic Acid
-0.5
N.D.
N.D.
-0.0
N.D.
auxotrophy
Dropout Complete
+0.0
N.D.
N.D.
-0.5
N.D.
growth on ricinoleic acid
YNB Ricinoleic Acid
-0.7
N.D.
N.D.
+0.2
N.D.
growth on ricinoleic acid
YNB Methylricinoleic Acid
+0.1
N.D.
N.D.
-0.5
N.D.
facs on lipid accumulation
Sorted No BODIPY Gate
-0.5
N.D.
N.D.
+0.2
N.D.
growth on ypd
YPD
-0.3
N.D.
N.D.
+0.0
N.D.
buoyancy on lipid accumulation
40 hrs Low Buoyancy
+0.4
N.D.
N.D.
-0.5
N.D.
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
+0.7
N.D.
N.D.
-0.7
N.D.
ypd buoyancy
40 hrs No Buoyancy Separation
-0.3
N.D.
N.D.
+0.5
N.D.
buoyancy on lipid accumulation
40 hrs High Buoyancy
+1.1
N.D.
N.D.
-0.6
N.D.
buoyancy on lipid accumulation
40 hrs Median Buoyancy
+0.7
N.D.
N.D.
-0.1
N.D.
facs on lipid accumulation
Sorted Low BODIPY Gate
+0.4
N.D.
N.D.
+0.5
N.D.
growth on ricinoleic acid
YNB Glucose
+0.5
N.D.
N.D.
+0.4
N.D.
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