Fitness Browser
Home
Find Gene
BLAST
Experiments
Organisms
Help
Gene
Fitness
Nearby
Cofit
Protein
Homologs
Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
Add gene:
Go
Number of genes on each side:
1
2
3
4
5
Go
Top 21 experiments (either direction), sorted by average fitness
Or view
all 21 experiments
or
choose conditions
or try the
comparative fitness browser
500 nt
8785 and 8786 are separated by 1671 nucleotides
8786 and 8787 are separated by 89 nucleotides
8787 and 8788 are separated by 266 nucleotides
8788 and 8789 are separated by 248 nucleotides
mRNA_417: 8785 - KOG4697 Integral membrane protein involved in transport between the late Golgi and endosome, at 973,590 to 974,560
8785
mRNA_418: 8786 - KOG2308 Phosphatidic acid-preferring phospholipase A1, contains DDHD domain, at 976,232 to 979,073
8786
mRNA_419: 8787 - HMMPfam-Major Facilitator Superfamily-PF07690,ProSiteProfiles-Major facilitator superfamily (MFS) profile.-PS50850,SUPERFAMILY--SSF103473, at 979,163 to 981,247
8787
mRNA_420: 8788 - K11209 yghU, yfcG GSH-dependent disulfide-bond oxidoreductase, at 981,514 to 982,786
8788
mRNA_421: 8789 - K11209 yghU, yfcG GSH-dependent disulfide-bond oxidoreductase, at 983,035 to 984,157
8789
Group
Condition
mRNA
_417
mRNA
_418
mRNA
_419
mRNA
_420
mRNA
_421
8785
8786
8787
8788
8789
ypd buoyancy
40 hrs No Buoyancy Separation
-0.4
+0.2
-0.0
+0.1
-0.8
auxotrophy
Dropout Complete
-0.1
-0.0
-0.5
+0.0
+0.0
buoyancy on lipid accumulation
40 hrs Median Buoyancy
-0.4
-0.2
-0.1
+0.4
-0.3
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
-0.6
+0.1
-0.3
+0.4
-0.2
facs on lipid accumulation
Sorted No BODIPY Gate
-0.1
-0.1
-0.3
-0.1
+0.1
auxotrophy
YNB Glucose 75mM Methionine
-0.6
-0.1
-0.2
+0.1
+0.2
auxotrophy
YNB Glucose
-0.3
-0.1
-0.3
-0.2
+0.4
buoyancy on lipid accumulation
40 hrs High Buoyancy
-0.6
+0.1
-0.1
+0.4
-0.1
facs on lipid accumulation
Sorted High BODIPY Gate
-0.1
+0.1
-0.0
-0.2
+0.1
auxotrophy
YNB Glucose 75mM Arginine
-0.1
+0.1
-0.1
-0.1
+0.1
facs on lipid accumulation
Sorted Low BODIPY Gate
-0.1
-0.0
-0.0
-0.3
+0.5
buoyancy on lipid accumulation
40 hrs Low Buoyancy
-0.5
-0.1
-0.1
+0.5
+0.2
growth on ricinoleic acid
YNB Glucose
-0.7
-0.0
+0.2
+0.1
+0.5
ypd buoyancy
40 hrs High Buoyancy
+0.3
+0.0
+0.2
-0.1
-0.3
ypd buoyancy
40 hrs Median Buoyancy
+0.1
-0.0
+0.1
+0.2
-0.1
growth on ricinoleic acid
YNB Methylricinoleic Acid
-0.4
+0.0
+0.3
-0.0
+0.5
growth on oleic acid
YNB Glucose
-0.2
-0.3
+0.2
+0.3
+0.3
ypd buoyancy
40 hrs Low Buoyancy
+0.2
+0.1
+0.3
+0.1
-0.2
growth on ypd
YPD
+0.1
-0.1
-0.3
+0.7
+0.7
growth on ricinoleic acid
YNB Ricinoleic Acid
+0.1
+0.1
+0.2
+0.2
+0.6
growth on oleic acid
YNB Oleic Acid
+0.3
-0.1
+0.1
+0.3
+0.6
remove
mRNA_417
plot
remove
mRNA_418
plot
remove
mRNA_419
remove
mRNA_420
plot
remove
mRNA_421
plot